Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq6 127 4e-24 seq2 102 2e-16 >seq6 Length=2017720 Score = 127 bits (140), Expect = 4e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 |||||||||||| || |||| |||||| || || || |||| ||||||||||| || Sbjct 429021 AGGTGAGGATCTTTGCAACTGCACTTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAA 428962 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | || | ||| | ||||||||||| | || || |||||| |||| ||||| || | Sbjct 428961 CCAGACTCACCTGCGCCTCAAGCGTGGCCAGCGTTACGGTCTCCTCGGCCCCAACGGTTC 428902 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 || |||| |||||| ||||| ||||| |||| ||||| || || || || || Sbjct 428901 CGGAAAGACCACTCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAA 428842 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566 |||||| | ||| || || || |||||||| |||||||| Sbjct 428841 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTCC 428799 Score = 91.5 bits (100), Expect = 3e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 || || |||||||||||||||||||| || ||| || ||| || | | | ||||| Sbjct 428654 CTCTCCGGTGGTTGGAAGATGAAGCTCGCTCTCTGCCGTGCCGTTTTCGAGAGCCCCGAT 428595 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 | || |||||||||||||| ||||||||| ||||| || ||||| || ||||| | | Sbjct 428594 ATTCTCCTGCTTGATGAGCCTACCAACCACTTGGACGTCAAGAACGTCGCATGGCTCGAG 428535 Query 279825 TCCTACCT 279832 |||||| Sbjct 428534 AACTACCT 428527 >seq2 Length=3132020 Score = 102 bits (112), Expect = 2e-16 Identities = 269/405 (66%), Gaps = 12/405 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| | Sbjct 933806 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGACG 933747 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || | | ||| || || || ||||| | Sbjct 933746 GCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGATCAGCGACGAACTCGATG 933687 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 |||| | ||||| | ||||||||||||| || | ||||||| || ||| | | Sbjct 933686 TACTCGCACATCAACTTGGAGTTCATGCCAAGCAGGCCGCAAGGAAGAGCGTCAGTCAGG 933627 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCA----CCTGTGCCAGAGA 251798 || || | ||| || | || ||||| | | || ||| | | || | | | Sbjct 933626 AACTCTTGCTCGATGCCGACGGCCTCGACAATGATGTCCTGAACGACCTTGGGGTCGGGG 933567 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAA-ACTGTTGGTGCAGACCCTCG 251856 | | | ||| || | ||| ||| | || || || | || ||| || |||||| Sbjct 933566 C-GGTGGTT---CATGTGGGAGAACAACAGGCAAGCGAAGTCAGT--GTGGAGGCCCTCG 933513 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||| | ||| ||||| | || || ||||| | ||||| ||| | | | Sbjct 933512 TCACGAGAGATCAGCTCATTGGAGAAGGTGAGACCGGGCATGAGGCCACGCTTCTTCAAC 933453 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||||||| | | ||||| |||||||| | | |||||||||| Sbjct 933452 CAGAAGATGGAGGCGAAGGAGCCAGAGAAGAAGATACCCTCGACA 933408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835601606531