Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1 176 8e-39 seq2 150 3e-31 seq7 129 1e-24 >seq1 Length=5488300 Score = 176 bits (194), Expect = 8e-39 Identities = 169/217 (78%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || |||||||||||||| ||||| || ||||| Sbjct 207379 CCACCACGTAGACGGAGAACCAAGTGCAGAGTGGACTCTTTTTGAATGTTGTAGTCGGAC 207438 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || ||| Sbjct 207439 AGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGA 207498 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | ||| ||| ||||||||||| | ||| || || Sbjct 207499 ATGCCCTCCTTGTCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCGACC 207558 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | ||||||||| ||||| || ||||||||||||| Sbjct 207559 TCAAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACGA 207595 >seq2 Length=3132020 Score = 150 bits (166), Expect = 3e-31 Identities = 321/474 (68%), Gaps = 14/474 (3%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 933843 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 933784 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| |||||||| ||||| | | ||| || || Sbjct 933783 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGACGGCGTTGTAGTACTTCTTGTTGCC 933724 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||| ||||| |||||||||||||||| || ||||| | ||||| Sbjct 933723 GAGGGCCACCAGCAGGCGATCAGCGACGAACTCGATGTACTCGCACATCAACTTGGAGTT 933664 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||||| || || ||| || | ||||| | ||| || | ||| || |||| || Sbjct 933663 CATGCCAAGCAGGCCGCAAGGAAGAGCGTCAGTCAGGAACTCTTGCTCGATGCCGACGGC 933604 Query 10175 TTCCTCGACGATGCTCTTTACCAC------GTCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228 || | | |||| || || || ||| ||| | | | |||| | | || Sbjct 933603 CTCGACAATGATGTCCTGAACGACCTTGGGGTC--GGGGC-GGTGGTTC---ATGTGGGA 933550 Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288 ||| || | || | ||||||||||||||| || ||| | ||| ||||| Sbjct 933549 GAACAACAGGCAAGCGAAGTCAGTGTGGAGGCCCTCGTCACGAGAGATCAGCTCATTGGA 933490 Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348 || |||||||||||||| || || || || |||||| |||| | ||| || || Sbjct 933489 GAAGGTGAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAGGAGCC 933430 Query 10349 GGAGAACAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 ||||| | | |||||| || ||| | |||| || || ||| ||||||| Sbjct 933429 AGAGAAGAAGATACCCTCGACAGCA-GCGAAGGCAACCAGACGCGAGGCGAAGG 933377 >seq7 Length=1586650 Score = 129 bits (142), Expect = 1e-24 Identities = 138/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 836225 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 836284 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| ||||| || || ||||| | ||||||| ||| Sbjct 836285 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 836344 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 836345 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 836403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621351654520