Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03-
24] 91 sequences; 28,360,408 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 176 8e-39
seq2 150 3e-31
seq7 129 1e-24
>seq1
Length=5488300
Score = 176 bits (194), Expect = 8e-39
Identities = 169/217 (78%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || |||||||||||||| ||||| || |||||
Sbjct 207379 CCACCACGTAGACGGAGAACCAAGTGCAGAGTGGACTCTTTTTGAATGTTGTAGTCGGAC 207438
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || || | || ||||| || |||
Sbjct 207439 AGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGA 207498
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| | ||| ||| ||||||||||| | ||| || ||
Sbjct 207499 ATGCCCTCCTTGTCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCGACC 207558
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| | ||||||||| ||||| || |||||||||||||
Sbjct 207559 TCAAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACGA 207595
>seq2
Length=3132020
Score = 150 bits (166), Expect = 3e-31
Identities = 321/474 (68%), Gaps = 14/474 (3%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || |||||||||||||| |||||| |
Sbjct 933843 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 933784
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
||||| ||| |||||||||||| |||||||| ||||| | | ||| || ||
Sbjct 933783 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGACGGCGTTGTAGTACTTCTTGTTGCC 933724
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | ||| ||||| |||||||||||||||| || ||||| | |||||
Sbjct 933723 GAGGGCCACCAGCAGGCGATCAGCGACGAACTCGATGTACTCGCACATCAACTTGGAGTT 933664
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||||| || || ||| || | ||||| | ||| || | ||| || |||| ||
Sbjct 933663 CATGCCAAGCAGGCCGCAAGGAAGAGCGTCAGTCAGGAACTCTTGCTCGATGCCGACGGC 933604
Query 10175 TTCCTCGACGATGCTCTTTACCAC------GTCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228
|| | | |||| || || || ||| ||| | | | |||| | | ||
Sbjct 933603 CTCGACAATGATGTCCTGAACGACCTTGGGGTC--GGGGC-GGTGGTTC---ATGTGGGA 933550
Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288
||| || | || | ||||||||||||||| || ||| | ||| |||||
Sbjct 933549 GAACAACAGGCAAGCGAAGTCAGTGTGGAGGCCCTCGTCACGAGAGATCAGCTCATTGGA 933490
Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348
|| |||||||||||||| || || || || |||||| |||| | ||| || ||
Sbjct 933489 GAAGGTGAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAGGAGCC 933430
Query 10349 GGAGAACAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401
||||| | | |||||| || ||| | |||| || || ||| |||||||
Sbjct 933429 AGAGAAGAAGATACCCTCGACAGCA-GCGAAGGCAACCAGACGCGAGGCGAAGG 933377
>seq7
Length=1586650
Score = 129 bits (142), Expect = 1e-24
Identities = 138/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | ||||| || | |||||| |||||||| ||
Sbjct 836225 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 836284
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || |||||||| ||||| || || ||||| | ||||||| |||
Sbjct 836285 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 836344
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| ||| || || || || | ||| ||||| || ||||| ||||||||||||||
Sbjct 836345 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 836403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621351654520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |