Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 156 4e-33 seq1 104 2e-17 seq7 87.8 2e-12 >seq2 Length=3132020 Score = 156 bits (172), Expect = 4e-33 Identities = 303/443 (68%), Gaps = 17/443 (4%) Strand=Plus/Plus Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461 |||| |||||||| |||||||| | || || || ||| ||| ||| ||||||| | Sbjct 933392 TGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCCATCTTCT 933451 Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521 | || | | ||| | |||||||| || || ||| ||| ||| |||| || || | Sbjct 933452 GGTTGAAGAAGCGTGGCCTCATGCCCGGTCTCACCTTCTCCAATGAGCTGATCTCTCGTG 933511 Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACCG 52575 |||| || || ||||| ||||| || ||||| || | ||| || | | ||| Sbjct 933512 ACGAGGGCCTCCACACTGACTTCGCTTGCCTGTTGTTCTCCCACATGAACCACCGCCCCG 933571 Query 52576 AAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGG 52635 | || ||| || || | ||| || ||||| || | ||||| | | Sbjct 933572 ACCCCAAGG--TCGTTCAGGAC----ATCATTGTC---GAGGCCGTCGGCATCGAGCAAG 933622 Query 52636 AGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCG 52695 |||| | || | ||| || || || ||||| ||||||||| | ||| ||||||| Sbjct 933623 AGTTCCTGACTGACGCTCTTCCTTGCGGCCTGCTTGGCATGAACTCCAAGTTGATGTGCG 933682 Query 52696 AGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTC 52754 ||||||||||||| || || ||||| ||| ||||| ||| |||| | | ||||||| | Sbjct 933683 AGTACATCGAGTTCGTCGCTGATCGCCTGCTGGTGGCCCTC-GGCAACAAGAAGTACTAC 933741 Query 52755 AACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTT 52814 ||||| ||| || || || || ||| | ||| || || | |||||||||||||| Sbjct 933742 AACGCCGTCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTC 933801 Query 52815 TTCGAGAAGCGAGTCGGCGAGTA 52837 ||||||||||| ||||| || || Sbjct 933802 TTCGAGAAGCGTGTCGGTGACTA 933824 >seq1 Length=5488300 Score = 104 bits (114), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| |||||| || | || | | | |||||| || ||||||||||| Sbjct 206922 GCCACCACGCAGACGCAACACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 206981 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| |||||| || || ||||| | |||| |||||||| ||||| ||||| Sbjct 206982 AAGTGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 207041 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| | || | || | ||| || | |||||| | ||| Sbjct 207042 GATACCCTCCTTGTC-CTGAATCTTGCTCTTGACGTTG-TCAATGGTGTCTGAGCTCTCA 207099 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| ||| | || || || |||| ||| || |||||||| ||||| Sbjct 207100 ACCTCGAGCGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAAATTTGCAT 207149 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | ||||| |||||||||||||||||| | Sbjct 207379 CCACCACGTAGACGGAGAACCAAGTGCAGAGTGGACTCTTTTTGAATGTTGTAGTCGGAC 207438 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| |||||| || || || |||| |||| || ||||| ||||| || || Sbjct 207439 AGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGA 207498 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || | |||| ||| || | |||||| | ||||| | Sbjct 207499 ATGCCCTCCTTGTC-CTGAATCTTGGACTTAACGTTG-TCGATGGTGTCAGATGACTCGA 207556 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 |||| | || | || || |||||||| || || || Sbjct 207557 CCTCAAGGGTGATGGTCTTTCCAGTCAGGGTCTTGAC 207593 >seq7 Length=1586650 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 836223 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 836282 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | || ||||| ||||| || || || || || || || || | || || || | ||| Sbjct 836283 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATC-CTGGATCTTGGTCTTGACGTTG 836341 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 836342 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 836400 Query 138603 AAAA 138606 ||| Sbjct 836401 GAAA 836404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261835501520