Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq7 136 4e-27 seq1 132 5e-26 seq5 89.7 6e-13 >seq7 Length=1586650 Score = 136 bits (150), Expect = 4e-27 Identities = 141/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || |||||||||||||||||||| | Sbjct 836223 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 836282 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | || |||||| ||| |||||| |||||| ||| | Sbjct 836283 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 836341 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || ||||| | || ||||| || |||||||| || || || Sbjct 836342 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 836401 Query 46583 AA 46584 || Sbjct 836402 AA 836403 >seq1 Length=5488300 Score = 132 bits (146), Expect = 5e-26 Identities = 175/239 (73%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| | ||| || | | |||||||||||| || | || |||||||| ||||| |||| Sbjct 206915 ATTACTGGCCACCACGCAGACGCAACACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGT 206974 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 |||| || || || || |||| || |||||||| || ||||| || | |||||||||| Sbjct 206975 AGTCCGAAAGTGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGT 207034 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---G 46534 | | || | | |||||||||| ||||| |||||| ||| | | | ||||| | Sbjct 207035 CAGGAGGGATACCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCAATGGTGTCTGAG 207093 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || | ||||||||| || || |||| || || ||||| |||||||| Sbjct 207094 CTC---TCAACCTCGAGCGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAAATTTGCAT 207149 Score = 114 bits (126), Expect = 1e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||| |||||||| || ||||| | || || ||||||||||| || || Sbjct 207695 CTCCTTCTGGATATTATAGTCGGAAAGCGTGCGACCATCCTCAAGCTGCTTGCCAGCAAA 207754 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | || |||||| ||| |||||| ||||| | Sbjct 207755 GATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATT 207814 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | || ||||| || ||||| || | |||||||| ||||| || Sbjct 207815 GTCGATGGTATCGCTGGACTCCACCTCAAGGGTGATGGTCTTGCCAGT 207862 Score = 107 bits (118), Expect = 2e-18 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| ||||| || ||||||||||| ||||| || |||| || ||||||||||||||||| Sbjct 207414 CTCTTTTTGAATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAA 207473 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| ||||| ||| | ||| Sbjct 207474 GATAAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTT-AACGT 207532 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || || || || | |||||||| || || ||||| || || | Sbjct 207533 TGTCGATGGTGTCAGATGACTCGACCTCAAGGGTGATGGTCTTTCCAGTCAGGGTCTTGA 207592 Query 46581 C 46581 | Sbjct 207593 C 207593 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||||||||| ||||| || || || | || || ||||||||||| ||||| Sbjct 207187 TCCTTCTGGATATTGTAATCGGAAAGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAG 207246 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||| |||| || | || |||||| || || || ||| | | Sbjct 207247 ATAAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTATCTTGAATTTTGGACTTCACATTA 207306 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| ||| || || || | ||||| || ||||| || || || ||||| Sbjct 207307 TCGATAGTGTCGGACGACTCGACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTAACG 207366 Query 46583 AAGATTTGCAT 46593 || || ||||| Sbjct 207367 AAAATCTGCAT 207377 >seq5 Length=2122312 Score = 89.7 bits (98), Expect = 6e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| | || ||||||||||| || ||||| Sbjct 1613508 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAA 1613567 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| |||||||||||| | || | | ||||||||| Sbjct 1613568 GATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 1613606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237757041320