Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq12 178 4e-39 seq14 107 6e-18 seq1 98.7 3e-15 seq4 91.5 4e-13 >seq12 Length=999707 Score = 178 bits (196), Expect = 4e-39 Identities = 565/873 (65%), Gaps = 5/873 (1%) Strand=Plus/Minus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 ||||| || |||||||| |||||||||||| || || || || | ||||||||| Sbjct 268030 CTGTACTCAACAATCTCGGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGG 267971 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 || || |||| |||||||||||||| || ||| | ||| | || ||||| |||| Sbjct 267970 TTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCGGTCTGA 267911 Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807 || || ||||| ||| || | |||| || || ||| | | ||| ||| Sbjct 267910 GCCTCGAGAATGGCGTACCAAAGCTTCTGGGCCTTGATAGTCTTACGGCCACGGCCCTCC 267851 Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| || ||| || || | | | || |||||||| |||| ||| ||||| Sbjct 267850 TGCTCGTACTTCGCGTAGAGGGCCTCGAACTCATCACCGTAGACATCAGCCAGGCCAGGA 267791 Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACA 155927 || | |||||| || || | ||| || | || |||| ||| || | | Sbjct 267790 GCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAAAGA 267731 Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTC 155987 || | ||| | ||| ||||||||||| | || |||||| | || || ||| Sbjct 267730 TCGGGGGTCCACAAAGCGTAGAAAAGGTCACGGGCGCGAACCTCCTCCTTACCATGGTTC 267671 Query 155988 TTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAA 156047 || || | || | ||| || | ||||| || |||||||| || || ||||| Sbjct 267670 TTGCGCAAATCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCCAGGTAGATGGCAAAG 267611 Query 156048 CTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCT 156104 |||| | ||| |||||||| || ||||| || || || ||||| || |||| Sbjct 267610 GCACCAGGGCGCTTATTACCACCCTGGTCCACATAGCGGGCGGTGTTATTAAACACACGC 267551 Query 156105 AGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAG 156164 |||||||||| |||||| ||||| | ||| || ||||| | || | ||||||| | | Sbjct 267550 AGCATAGGAACAATACCGTTGGAGGAGCCGTTAGTTCCACCGATGTAAGAACCAGTAGCG 267491 Query 156165 CGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCC 156224 |||| || | || || || |||||||| | || ||||| || || | Sbjct 267490 CGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGAAATCATGGCACAGGTC 267431 Query 156225 TTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAA 156284 || | ||||| | ||||||||||| || | ||| | || |||| || Sbjct 267430 TTAAGAGTATCATAGATACCTTCAATGCTGTCCGCGCTCATGTCAACCAGGAAGCAAGAT 267371 Query 156285 CTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATAC 156344 | |||||| | || || | || ||||| || || || | ||||| | || || Sbjct 267370 GCAAGCTGAGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCATGGGTGAAGAAC 267311 Query 156345 TTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAG 156404 || | ||||| ||| ||||||||| | ||| |||| || ||||| || | | Sbjct 267310 TTTTGGGACATCAAATGGTATGTCTCAATGGCCTTTTCAATATCCTCACCGTGGATTCCG 267251 Query 156405 ATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACT-CCATCAATTCGCAG 156463 | || || | ||| || ||||| |||||||| ||| || | || | |||||| || Sbjct 267250 ACAGCAACACGCATTAGCAAGTGCTGGGGACGCTCAGCAA-CATTACCGTTAATTCGAAG 267192 Query 156464 AAGGTATGCGCGTTCCAGAGTTTTAAACCCGAA 156496 |||||||| || || || || || |||||||| Sbjct 267191 AAGGTATGAACGCTCGAGTGTCTTGAACCCGAA 267159 >seq14 Length=555456 Score = 107 bits (118), Expect = 6e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483 ||| | ||| || | | | | |||||| ||||| | || || |||| ||| | Sbjct 211114 ACAGATATGAACACGGAACGGATCAGAAACGTCAAAGAGACGCTCCTTTAGGAAAGCACT 211055 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 |||||||| | |||||||||||||| ||||| || |||||||| ||||||||||| || Sbjct 211054 GGCACCGTGGGCGATCATACAATCACGTTCCATCTCTCCGAAACGGAGACCACCATCACG 210995 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 || | |||||| |||||||||| || ||| | ||||||| || || || Sbjct 210994 GGCACGACCCTCCACAGGCTGACGCGTCAGAATCTGAGTAGGACCACGGGCACGAGCGTG 210935 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657 |||||| | ||||| || |||||||||||| | | |||||| | ||| Sbjct 210934 GATCTTATCGTCCACCATGTGGCGCAGACGCTGGTAGTAGGTGGGACCCAAGAA 210881 >seq1 Length=5488300 Score = 98.7 bits (108), Expect = 3e-15 Identities = 106/140 (76%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 ||||| || | | ||| ||||||||| | || ||||| |||||| | ||||||||| Sbjct 5397683 AGAATCTCCTTGAGACGTGGAACACCAAGCGTGACGTT---CTTGGAGGACACACCAGCA 5397739 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 ||||||||||| ||||| || | |||||| | |||||||||||| || ||||||| Sbjct 5397740 AAGTGGAAAGTGTTCAGTGTCATTTGAGTTGCAGGCTCACCAATAGACTGAGCCGCAAGA 5397799 Query 301933 ATACCAACCATTTCTCCTGG 301952 | || ||||| || || || Sbjct 5397800 ACGCCGACCATCTCACCAGG 5397819 >seq4 Length=2277171 Score = 91.5 bits (100), Expect = 4e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 233275 ACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTTGA 233334 ||||| ||||||| ||||||||||||||| ||||| | ||||||||| || | | ||| Sbjct 1582362 ACCGTACGCAATCAAACAATCACGTTCCATCTCACCGAGACGCAGACCTCCGTTACGTGA 1582421 Query 233335 CCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTAAT 233394 | ||||| | | ||||| || | | || | ||||||| |||||| | | || Sbjct 1582422 ACGACCCTCGGTAGGCTGACGGGTGAGAGTAGCAGTGGGACCCTTAGCACGTGAGTGCAT 1582481 Query 233395 TTTATCTTTAACCATATGCTTCA 233417 ||||||| |||||| ||||||| Sbjct 1582482 CTTATCTTGAACCATGTGCTTCA 1582504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815883952667