Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2 136 5e-26 seq12 120 4e-21 seq1 109 7e-18 >seq2 Length=3132020 Score = 136 bits (150), Expect = 5e-26 Identities = 180/245 (73%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 933833 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 933774 Query 868751 AACTCCATCCACGGGAACGGGTTG--GGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACG 868808 ||||||| | ||| |||||| ||||| |||||| ||| | | ||||| | | Sbjct 933773 GACTCCATGAAGTCGAAGGGGTTGACGGCGT--TGTAGTACTTCTTGTTGCCGAGGGCCA 933716 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 | |||||||| || ||||| ||||||||||||| |||||| | || ||||||||| | Sbjct 933715 CCAGCAGGCGATCAGCGACGAACTCGATGTACTCGCACATCAACTTGGAGTTCATGCCAA 933656 Query 868869 TGAGCGCCAC-CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACG 868927 || ||| | || || | || ||| ||||||| |||||| ||||||||||||| Sbjct 933655 GCAG-GCCGCAAGGAAGAGCGTCAGTCAGGAACTCTTGCTCGATGCCGACGGCCTCGACA 933597 Query 868928 ATGAT 868932 ||||| Sbjct 933596 ATGAT 933592 Score = 96.9 bits (106), Expect = 4e-14 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| ||| ||||| || ||| |||| ||| |||||||||||||| |||||| Sbjct 933518 CCCTCGTCACGAGAGATCAGCTCATTGGAGAAGGTGAGACCGGGCATGAGGCCACGCTTC 933459 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || | ||| ||||||| | ||| ||| ||||| ||||| |||||||| || || ||| Sbjct 933458 TTCAACCAGAAGATGGAGGCGAAGGAGCCAGAGAAGAAGATACCCTCGACAGCAGCGAAG 933399 Query 869300 CCGATGAGCCGCTCGGCAAAGGT 869322 | | || ||| ||| ||||| Sbjct 933398 GCAACCAGACGCGAGGCGAAGGT 933376 >seq12 Length=999707 Score = 120 bits (132), Expect = 4e-21 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||| | || ||||| |||| || || | || |||||| |||| |||||| Sbjct 814205 GCCGCCAACTACTTGGATATCAAAGCTCTTCTTGACGTCGGTTGCAAGACTGTTGCCAAC 814264 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||||| || |||||||| |||||||| ||||||||| || Sbjct 814265 ATGATCAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACTTTTAACATCCAG 814315 Score = 111 bits (122), Expect = 2e-18 Identities = 279/429 (65%), Gaps = 8/429 (2%) Strand=Plus/Minus Query 1628167 ACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGT 1628225 || ||||||||||||||||| | | || | ||||||||||||| ||||||| | | Sbjct 268021 ACAATCTCGGTGCACAGGTTAGAGCTGCGAA-TAGTACCCAGGTTCTTCTGGTTGCTCTT 267963 Query 1628226 CAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGAC 1628285 | |||| || ||||||| ||||||| | || || |||||| |||| ||| ||| Sbjct 267962 CTTGTTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCGGTCTGAGCCTCGAG 267903 Query 1628286 GATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTC---CGCGCGCGGCCCTNNNNNNN 1628342 ||||| |||| | || | || | || |||| || | ||||||| Sbjct 267902 AATGGCGTACCAAAGCTTCTGGGC---CTTGATAGTCTTACGGCCACGGCCCTCCTGCTC 267846 Query 1628343 NNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCTC 1628402 || || | | |||||| || |||||| || ||||| Sbjct 267845 GTACTTCGCGTAGAGGGCCTCGAACTCATCACCGTAGACATCAGCCAGGCCAGGAGCCTC 267786 Query 1628403 GGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACA 1628462 | || || ||||| | |||||| || || | | |||| ||| || || || Sbjct 267785 GTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAAAGATCGGG 267726 Query 1628463 CGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTT 1628522 ||||||| ||||| || ||||| || || || ||||||||| || |||||||| Sbjct 267725 GGTCCACAAAGCGTAGAAAAGGTCACGGGCGCGAACCTCCTCCTTACCATGGTTCTTGCG 267666 Query 1628523 GAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 1628582 | ||||| | |||| | || ||||||||||||||||||||| ||||||||| || Sbjct 267665 CAAATCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACC 267606 Query 1628583 CTTGCGCTT 1628591 |||||| Sbjct 267605 AGGGCGCTT 267597 >seq1 Length=5488300 Score = 109 bits (120), Expect = 7e-18 Identities = 119/157 (76%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || | || || |||||| ||||||||||| | || || |||||| Sbjct 4526610 GACAGCATCGGTGGAAGCGTCACATGCGTGATCCGCAACGTGCCAGTGGGACTTGGCGAG 4526551 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | || || ||||| |||||| ||||| ||||| || ||| Sbjct 4526550 CCCTGCTTCGACAAGCTTGAAGCTAAGCTCGGCCACGCGATGCTCAGCATCCCCGCAACC 4526491 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 4526490 AAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGCTGCG 4526454 Score = 105 bits (116), Expect = 8e-17 Identities = 218/322 (68%), Gaps = 8/322 (2%) Strand=Plus/Minus Query 18096 CTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCAT 18155 || ||||||||| ||| | ||||||||||||| | |||||| || ||| |||| Sbjct 4527290 CTATGGCGAGTCCCACTGCCGCTCCGTCGGCTGCATCGTTGACGGCTGCCCTCCGGGCAT 4527231 Query 18156 GCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGC 18215 || ||| ||||| |||||||||| || ||| || || ||||| || |||||| |||| Sbjct 4527230 GCAACTCACCGAGACCGACATCCAACCCCAGATGACCCGCCGCCGTCCCGGCCAGAGCGC 4527171 Query 18216 ACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGG 18275 || | || ||||| ||||| || || ||| |||||||| ||||| ||| || Sbjct 4527170 CCTCACTACCCCGCGGGACGAGAAGGACCGAGTCGAGATCCAGTCAGGCACCGAGTTTGG 4527111 Query 18276 CCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGA 18335 | || || ||| | || | | | | | || ||| |||||||| ||| || Sbjct 4527110 TATTACTCTGGGCACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGTCCCAAGGA 4527051 Query 18336 CTATTCCGACATGTGCAA------GGTGCCGCGGCCCT-CACACGCCGACTACACCTACA 18388 ||| | || | ||| || || | ||||| || ||||||| ||||||| Sbjct 4527050 CTACGGTGGCA-GCACAATGGACCTGTACCCCCGCCCTAGCCATGCCGACTTCACCTACC 4526992 Query 18389 TGGCCAAGTACGGCATCAAGGC 18410 | | ||||||||| ||||||| Sbjct 4526991 TTGAGAAGTACGGCGTCAAGGC 4526970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107131732113847