Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq12 129 9e-24 seq2 122 1e-21 seq10 95.1 2e-13 >seq12 Length=999707 Score = 129 bits (142), Expect = 9e-24 Identities = 284/426 (67%), Gaps = 12/426 (3%) Strand=Plus/Minus Query 2071584 CTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGG 2071641 ||||||||||||||| | | || | || |||||||||| ||||||||| || | Sbjct 268016 CTCGGTGCACAGGTTAGAG--CTGCGAATAGTACCCAGGTTCTTCTGGTTGCTCTTCTTG 267959 Query 2071642 TTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATG 2071701 ||| || ||||||| |||||| | || ||| |||||| |||| ||| || ||| Sbjct 267958 TTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCGGTCTGAGCCTCGAGAATG 267899 Query 2071702 GCCGACCAAATTTGGCGCGCGGGCACCGAG-GTCCT-CG--CGCGGCCCTNNNNNNNNNN 2071757 || |||||| || |||| || ||| | || | ||||||| Sbjct 267898 GCGTACCAAA----GCTTCTGGGCCTTGATAGTCTTACGGCCACGGCCCTCCTGCTCGTA 267843 Query 2071758 NNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGA 2071817 ||||||| || || | | |||| | || |||||| || |||||| Sbjct 267842 CTTCGCGTAGAGGGCCTCGAACTCATCACCGTAGACATCAGCCAGGCCAGGAGCCTCGTT 267783 Query 2071818 CGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGT 2071877 ||||| ||||| | |||||| ||| | | | ||||| ||| || || ||| || Sbjct 267782 GGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAAAGATCGGGGGT 267723 Query 2071878 CCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAG 2071937 ||||| |||| || || || || || || ||||||||| || |||||||| || Sbjct 267722 CCACAAAGCGTAGAAAAGGTCACGGGCGCGAACCTCCTCCTTACCATGGTTCTTGCGCAA 267663 Query 2071938 GTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTT 2071997 ||||| | |||| || || ||||||||||||||||||||| ||||||||| || Sbjct 267662 ATCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCAGG 267603 Query 2071998 GCGCTT 2072003 |||||| Sbjct 267602 GCGCTT 267597 Score = 102 bits (112), Expect = 1e-15 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||| | || ||||| | || || || | || |||||||| || |||||| Sbjct 814205 GCCGCCAACTACTTGGATATCAAAGCTCTTCTTGACGTCGGTTGCAAGACTGTTGCCAAC 814264 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||||| || ||||| || |||||||| ||||||||| || Sbjct 814265 ATGATCAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACTTTTAACATCCAG 814315 >seq2 Length=3132020 Score = 122 bits (134), Expect = 1e-21 Identities = 179/251 (71%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 933841 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 933782 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| ||||||| | ||| |||||| | | ||||| ||||| | |||| Sbjct 933781 GGGAGATGGACTCCATGAAGTCGAAGGGGTTGACGGCGTTGTAGTACTTCTTGTTGCCGA 933722 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | |||||||| || |||||||| || ||||||| |||||| | || ||||| Sbjct 933721 GGGCCACCAGCAGGCGATCAGCGACGAACTCGATGTACTCGCACATCAACTTGGAGTTCA 933662 Query 794071 TGCCGATGAGCGCCAC-GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129 |||| | || ||| | || || | || | | ||||||| |||||| |||||||| Sbjct 933661 TGCCAAGCAG-GCCGCAAGGAAGAGCGTCAGTCAGGAACTCTTGCTCGATGCCGACGGCC 933603 Query 794130 TCGATGATGAT 794140 |||| ||||| Sbjct 933602 TCGACAATGAT 933592 Score = 87.8 bits (96), Expect = 3e-11 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| ||| ||||| || ||| ||| ||| |||||||||||||| |||||| Sbjct 933518 CCCTCGTCACGAGAGATCAGCTCATTGGAGAAGGTGAGACCGGGCATGAGGCCACGCTTC 933459 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || | ||| ||||||| ||| ||| ||||| ||||| |||||||| || || ||| Sbjct 933458 TTCAACCAGAAGATGGAGGCGAAGGAGCCAGAGAAGAAGATACCCTCGACAGCAGCGAAG 933399 Query 794461 CCGACGAGCCGCTCGGCAAAAGT 794483 | || || ||| ||| || || Sbjct 933398 GCAACCAGACGCGAGGCGAAGGT 933376 >seq10 Length=1117375 Score = 95.1 bits (104), Expect = 2e-13 Identities = 128/175 (73%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || |||||||| ||||| |||||||||||| ||||||| || ||| | | Sbjct 1106339 GTACTTGGTCACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGAAG 1106280 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 || || || || | |||||||||||| |||| | ||| || |||||| || | Sbjct 1106279 AATGAGACGGACAGAGGTCTGGATCTCCCGGGAGGAGATGGTAGACTTCTTGTT-GTAAG 1106221 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGA 1485644 | ||||| | ||||||||| ||| || |||| ||||| || |||||| Sbjct 1106220 CAGCCAGCTTGGAGGCCTCGGTAGCGACACGCTCGAAGATGTC--TGGAAAACGA 1106168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916236719914949