Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2 141 9e-29 seq1 113 4e-20 seq7 107 2e-18 >seq2 Length=3132020 Score = 141 bits (156), Expect = 9e-29 Identities = 342/507 (67%), Gaps = 13/507 (3%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || ||||| || ||||| ||| || ||| | Sbjct 933828 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTC 933769 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| ||||| |||| ||| | ||| | || ||||| Sbjct 933768 CATGAAGTCGAAGGGGTTGACGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAG 933709 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 || || || || ||||| |||||||||||||| ||| | ||||||||| |||| || Sbjct 933708 GCGATCAGCGACGAACTCGATGTACTCGCACATCAACTTGGAGTTCATGCCAAGCAG-GC 933650 Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589 | | | || || | || | ||||| | ||| ||| | || ||||| | ||| Sbjct 933649 CGCAAGGAAGAGCGTCAGTCAGGAACTCTTGCTCGATGCCGACGGCCTCGACAATGATGT 933590 Query 120590 C--GAGC-ATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACG 120646 | || | | || || |||| | || || ||| | | | | ||||||| | Sbjct 933589 CCTGAACGACCTTGGGGTCGGGGCGGTGGT--TC-ATGTGGGA---GAACAACAGGCAAG 933536 Query 120647 CAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGG 120706 | ||||| ||||| ||||||||||| || || |||||||| ||| || || || |||| Sbjct 933535 CGAAGTCAGTGTGGAGGCCCTCGTCACGAGAGATCAGCTCATTGGAGAAGGTGAGACCGG 933476 Query 120707 GCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGC 120766 |||||| ||| | |||| | |||| |||| ||| ||| ||| || ||||| | | Sbjct 933475 GCATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAGGAGCCAGAGAAGAAGATAC 933416 Query 120767 CCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT-GTCGATC 120825 |||| || || ||||| |||| ||| ||| || || | | || | | || |||| Sbjct 933415 CCTCGACAGCAGCGAAGGCAACCAGACGCGAGGCGAAGGTTGAC-TCACGGTCGTTGATC 933357 Query 120826 CACTTCATGGCCCACTCGGCCTTTTTG 120852 || | |||||| | |||||| ||| Sbjct 933356 CAGCGGAGGGCCCAGTTGGCCTTCTTG 933330 >seq1 Length=5488300 Score = 113 bits (124), Expect = 4e-20 Identities = 146/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 |||| ||| ||||| || ||||| || | | ||| ||| |||||| |||||||| Sbjct 206952 GGTGCTCTCCTTCTGGATGTTGTAGTC--CGAAAGTGTACGTCCGTCCTCCAGCTGCTTA 207009 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||||||||| |||||||| || |||||||| ||||| | Sbjct 207010 CCAGCGAAGATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATCTTGCTC 207069 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | |||| ||||| | | ||| || |||| |||| ||| || ||||||| | Sbjct 207070 TTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAGCGTGATGGTCTTTCCGGTCAAA 207129 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || || ||||| ||||| Sbjct 207130 GTCTTGACAAAAATTTGCAT 207149 Score = 109 bits (120), Expect = 5e-19 Identities = 147/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 ||||| || ||||| |||||||||||| | ||| ||| || || |||||||||| Sbjct 207181 GTGGATTCCTTCTGGATATTGTAATCGGAAA--GTGTACGGCCATCTTCAAGCTGCTTGC 207238 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-C 133580 | ||| | || || |||||||| ||||| || ||||| ||||| || ||| ||| | | Sbjct 207239 CTGCGAAGATAAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTATC-TTGAATTTTGGAC 207297 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | || | ||||||| | ||| || |||| |||| || |||||||| || Sbjct 207298 TTCACATTATCGATAGTGTCGGACGACTCGACTTCGAGTGTGATAGTCTTGCCGGTGAGT 207357 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || |||||||||||||| Sbjct 207358 GTCTTAACGAAAATCTGCAT 207377 Score = 109 bits (120), Expect = 5e-19 Identities = 130/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| ||||| || ||| | |||| ||| | ||||| ||||||||||| Sbjct 207690 GTGGACTCCTTCTGGATATTATAGTCGGAAAGCGTGCGACCA-TCCTCAAGCTGCTTGCC 207748 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| ||||||||||| ||||| || |||||| ||| Sbjct 207749 AGCAAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGACTT 207808 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | || ||| ||| |||||| || | ||||| ||| ||||| || Sbjct 207809 GACATTGTCGATGGTATCGCTGGACTCCACCTCAAGGGTGATGGTCTTGCCAGT 207862 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACG--AGTCCTCGAGCTGCTTGC 133521 ||||||||||| || || ||||| ||| || | | ||| |||||| |||||||||| Sbjct 207409 GTGGACTCTTTTTGAATGTTGTAGTCGGACA--GAGTACGTCCGTCCTCCAGCTGCTTGC 207466 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || || ||||| |||||||| ||||| || Sbjct 207467 CGGCGAAGATAAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACT 207526 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | | ||| || || | ||||| ||| || || ||||| | Sbjct 207527 TAACGTTGTCGATGGTGTCAGATGACTCGACCTCAAGGGTGATGGTCTTTCCAGTCAGGG 207586 Query 133642 TTTTTACGA 133650 | || |||| Sbjct 207587 TCTTGACGA 207595 >seq7 Length=1586650 Score = 107 bits (118), Expect = 2e-18 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| |||| || ||| | | | ||||||||||||||||| ||| | || Sbjct 836225 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGCCGGCGAAGAT 836283 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||||||||| || || ||||| ||||| || |||||| ||||| | || Sbjct 836284 CAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTC 836343 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | ||| || |||| ||| | ||| || || ||||| || || ||||| Sbjct 836344 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 836403 Query 133652 A 133652 | Sbjct 836404 A 836404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420250108840