Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2 140 5e-27 >seq2 Length=3132020 Score = 140 bits (154), Expect = 5e-27 Identities = 216/303 (71%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||| || ||||| |||||||| |||||| | |||| Sbjct 932927 GATTTGGCAAATGTAC-AAGAAGGCCGAAGCTTCCTTCTGGACCGCTGAGGAGATTGACC 932985 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| ||| |||||| ||||| | ||| Sbjct 932986 TCTCCAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTC 933041 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||||| | || || ||| || ||| ||| || || || ||||||||| | Sbjct 933042 ATCTCCCACGTCTTGGCTTTCTTT-GCTGCCTCCGACGGTATTGTCAACGAGAACCTCGT 933100 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | ||||||||| | || ||||| |||| || ||||| |||||||| Sbjct 933101 TGAGCGTTTCAGTTCAGAGGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 933160 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 || || ||||||||||| || || ||||| || || || ||||||||| ||||||| Sbjct 933161 TATGATGGAGAACATCCACTCCGAGACTTACTCCCTGCTCATTGACACCTACATCAAGGA 933220 Query 1456068 CCC 1456070 || Sbjct 933221 GCC 933223 Score = 116 bits (128), Expect = 5e-20 Identities = 183/254 (72%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCG-GTGGC 1456581 ||||| ||||||||||||| |||||| ||||||| | | || | || || | ||| Sbjct 933592 ATCATTGTCGAGGCCGTCGGCATCGAGCAAGAGTTCCTGACTGACGCTCTTCCTTGCGGC 933651 Query 1456582 GCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641 || | ||||||||| ||| | | |||||| ||||||| || || ||||| || ||| Sbjct 933652 -CTGCTTGGCATGAACTCCAA-GTTGATGTGCGAGTACATCGAGTTC-GTCGCTGATCGC 933708 Query 1456642 CTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGAT 1456701 ||||| | ||| |||||| | ||||| ||||| | | |||||| ||| | || Sbjct 933709 CTGCTGGTGGCCCTCGGCAACA-AGAAGTACTACAACGCCGTCAACCCCTTCGACTTCAT 933767 Query 1456702 GGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGC 1456760 ||||| ||||| || | |||||||||||||| |||||| || || || || ||| Sbjct 933768 GGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 933827 Query 1456761 CAAGGCCGGCGTCA 1456774 ||||| || |||| Sbjct 933828 GAAGGCTGGTGTCA 933841 Score = 95.1 bits (104), Expect = 2e-13 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809 ||||||||| || | |||||| |||| || |||||||||||| |||| | |||||| Sbjct 1638682 GCAGACCTGATCTCACTGGGCGCGATCGGCGCCCGCACCACCGAGTCCCAGCTTCACCGC 1638623 Query 165810 GAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGTG 165869 ||| | || |||| | || | | ||||| |||| ||| ||| |||||||||||| | | Sbjct 1638622 GAGCTCGCCTCGGGGTTGTCCTTCCCCATCGGCTACAAGAACGGCACCGACGGCAACCTT 1638563 Query 165870 GCGACGGCCCTCGATGCCGTGCGCACTGCCGCCCAGCCACACACCTTTCTCTGGGTC 165926 | ||| | |||||| | || | ||| | || || ||| ||| ||| | ||| Sbjct 1638562 ACCGTCGCCGTTGATGCCATCGGCGCCGCCTCGCACCCCCACCGCTTCCTCGGTGTC 1638506 Score = 87.8 bits (96), Expect = 3e-11 Identities = 114/154 (74%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 || |||||| ||||||| | ||||||||| | | | || || ||| ||| || Sbjct 933331 AAGAAGGCCAACTGGGCCCTCCGCTGGATCAACGACC-GTGAGTCAAC-CTTCGCCTCGC 933388 Query 1456183 GGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCT 1456241 | || || | ||| || || |||||||| ||||| ||||| ||| ||| | |||||| Sbjct 933389 GTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCCATCT 933448 Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 | ||| | |||||||| ||||||||||||||||| Sbjct 933449 TCTGGTTGAAGAAGCGTGGCCTCATGCCCGGTCT 933482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177802422882742