Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq12 237 2e-57 seq2 113 6e-20 seq1 96.9 4e-15 >seq12 Length=999707 Score = 237 bits (262), Expect = 2e-57 Identities = 572/861 (66%), Gaps = 11/861 (1%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || |||| || |||| ||||| |||||| ||||| | ||||||| | | Sbjct 268078 GGGAGTGCGAGGGAAGCCAGGTTGCAGACAGCCACTTCATCAGGGGCACTGTACTCAACA 268019 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | ||| || || ||| || |||| ||||| ||||| ||||||||| Sbjct 268018 ATCTCGGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTGCTCTTCTTG 267959 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| |||||||||||||||||| | || | || ||||| ||||| | | |||||| Sbjct 267958 TTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCGGTCTGAGCCTCGAGAATG 267899 Query 111410 GCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 111465 || | ||||| | || | | || | || | || |||| || |||||| |||||| Sbjct 267898 GCGTACCAAAGCTTCTGGGCCTTG----ATAGTCTTACGGCCACGGCCCTCCTGCTCGTA 267843 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 ||| | ||||||||| || ||||| ||||| | || | || || || |||| || Sbjct 267842 CTTCGCGTAGAGGGCCTCGAACTCATCACCGTAGACATCAGCCAGGCCAGGAGCCTCGTT 267783 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || ||||| || | ||| | ||| ||||||| |||||||||||||| || || | Sbjct 267782 GGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAAAGATCGGGGGT 267723 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||||| | | || || || | ||| |||| || | ||| ||||| || || Sbjct 267722 CCACAAAGCGTAGAAAAGGTCACGGGCGCGAACCTCCTCCTTACCATGGTTCTTGCGCAA 267663 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTT 111705 || |||||||| | || ||| |||||||| ||||| || |||| || | | || Sbjct 267662 ATCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCAGG 267603 Query 111706 TCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 111762 || | ||| | || | |||||||| || ||| ||||| || || ||||| || Sbjct 267602 GCGCTTATTACCACCCTGGTCCACATAGCGGGCGGTGTTATTAAACACACGCAGCATAGG 267543 Query 111763 AATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 111822 || |||||| | || || || || || | || ||| | | || | | Sbjct 267542 AACAATACCGTTGGAGGAGCCGTTAGTTCCACCGATGTAAGAACCAGTAGCGCGAATGCG 267483 Query 111823 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 111882 |||| | || || ||||| || || ||| || || ||||| | ||||||| Sbjct 267482 GTGGACATTCAGACCGATACCACCGGCGGTCTTGGAAATCATGGCACAGGTCTTAAGAGT 267423 Query 111883 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 111942 |||||||||| | || |||| | | || | | ||||||||| | | ||| Sbjct 267422 ATCATAGATACCTTCAATGCTGTCCGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTG 267363 Query 111943 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGA 112002 ||| || ||| | |||||||| || || || | || || |||| | |||||| Sbjct 267362 AGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCATGGGTGAAGAACTTTTGGGA 267303 Query 112003 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGAC 112062 |||| | ||||||||| | | | ||||| || || |||||||| |||| || || Sbjct 267302 CATCAAATGGTATGTCTCAATGGCCTTTTCAATATCCTCACCGTGGATTCCGACAGCAAC 267243 Query 112063 CCGCATGAACATGTACTGTGG 112083 ||||| | || || ||| || Sbjct 267242 ACGCATTAGCAAGTGCTGGGG 267222 >seq2 Length=3132020 Score = 113 bits (124), Expect = 6e-20 Identities = 306/464 (66%), Gaps = 32/464 (7%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| ||||| |||||||| |||||||||||||| ||| | ||| ||| ||||| Sbjct 933824 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 933765 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAATGGGTGGCACCCCAACTTGTTT--GAGG---- 122484 ||||| || || || ||||| || | || | ||||| |||| Sbjct 933764 AAGTCGAAGGGGTTGACGGCGTT--------GTAGTACTTC---TTGTTGCCGAGGGCCA 933716 Query 122485 -----AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGA 122539 || ||||| | || |||| ||||||||| ||||| || |||||||| || | Sbjct 933715 CCAGCAGGCGATCAGCGACGAACTCGATGTACTCGCACATCAACTTGGAGTTCATGCCAA 933656 Query 122540 TGAGGTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCA 122599 ||| || || || ||||| | |||| ||| ||| || | || ||||| | Sbjct 933655 GCAGGCCGCAAGGAAGAGCGTCAGTCAGGAACTCTTGCTCGATGCCGACGGCCTCGACAA 933596 Query 122600 CGATGGCGTGGAT-AGTTTCGGTAGT-GGGTCTATTACGCAAAGTCTTGAAGAGCTCCAC 122657 |||| | || | | || || || ||| | | || | | | ||| | || Sbjct 933595 TGATGTCCTGAACGACCTTGGG--GTCGGGGCGGTGGTTCA---TGTGGGAGAACAACAG 933541 Query 122658 G---GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAG 122714 | || || || |||||| ||||| || || || || || ||||| |||||| || Sbjct 933540 GCAAGCGAAGTCAGTGTGGAGGCCCTCGTCACGAGAGATCAGCTCATTGGAGAAGGTGAG 933481 Query 122715 ACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAA 122774 ||| |||||||| || |||||||||||||| | || | | ||| || || |||||||| Sbjct 933480 ACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAGGAGCCAGAGAAGAA 933421 Query 122775 GATACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 ||||||||| ||| || || |||| || || |||||||| Sbjct 933420 GATACCCTCGACAGCAGCGAAGGCAACCAGACGCGAGGCGAAGG 933377 >seq1 Length=5488300 Score = 96.9 bits (106), Expect = 4e-15 Identities = 213/312 (68%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGATTTCAAAGAG 11688 ||||| || ||||||||||||| ||| || || || | ||| ||||| | | ||||| Sbjct 3929430 GCATCGATTTCATCAATGAAGATAATGCAGGGGGTGTTCTTC-CGGGCATTGGCGAAGAG 3929372 Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAG-C 11747 |||||| || | || ||| ||||| |||||||| || || || | || || | | Sbjct 3929371 ATCGCGGACACGAGAGGGACCAACACCGACAAACATTTCGACGAACTCTGAACCACTGAC 3929312 Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807 |||| | ||| || || |||||||| ||| | || || || | ||||| || | Sbjct 3929311 ACTGTA-GAAAGGCACGCCAGATTCACCGGCGGTAGCCTTAGCAAGCAATGTCTTACCAG 3929253 Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCCAAAATA 11865 |||| || ||| | |||| ||| || ||||| ||||| ||||| |||| | | Sbjct 3929252 TACCAGGGGGACCTGAAAGAATGGCACCACGGGGAATCTTTGCACCTAGCTTCTCGA--A 3929195 Query 11866 TCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAAT 11925 | |||||| |||| ||| ||| |||| || | |||| | ||||| |||| || Sbjct 3929194 CCGCTCGGGCTGCTGGAGGAAACTAACAAATTCCATGATTTCAACCTTGGCTTCGTCCAT 3929135 Query 11926 CCCCTCAACATC 11937 ||| |||| || Sbjct 3929134 GCCCGCAACGTC 3929123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031285613600