Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03-
24] 91 sequences; 28,360,408 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 3e-15
>seq1
Length=5488300
Score = 96.9 bits (106), Expect = 3e-15
Identities = 155/219 (71%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129
|| ||||||| || || |||||||| || || || || || || | |||||| ||| ||
Sbjct 206935 CGCAACACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGTGTACGTCCG 206994
Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189
|| || ||||| || || || || ||||||||||||||||| | || | | ||| |||
Sbjct 206995 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTG 207054
Query 39190 TCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGT 39245
||| || || |||| ||| | | | || || ||| ||| || || | |||
Sbjct 207055 TCCTGAATCTTGCTCTTGA-CGTTGTCAATGGTGTCTGAGCT---CTCAACCTCGAGCGT 207110
Query 39246 GATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||| | ||||| |||| || || ||||| ||||||||
Sbjct 207111 GATGGTCTTTCCGGTCAAAGTCTTGACAAAAATTTGCAT 207149
Score = 89.7 bits (98), Expect = 4e-13
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || ||| ||||||||| || || || |||| || || ||| |||| ||
Sbjct 207397 ACCAAGTGCAGAGTGGACTCTTTTTGAATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 207456
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192
||||| ||||| || || ||||| ||||||||||| | ||| | || ||| ||||||
Sbjct 207457 AGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 207513
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
|||| || || ||| ||| || || |||||||| |||| ||| || || | || |||
Sbjct 207678 ACCAGGTGAAGAGTGGACTCCTTCTGGATATTATAGTCGGAAAGCGTGCGACCATCCTCA 207737
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| ||||| ||||| || | |||||||||||| | || | || ||| || ||| |
Sbjct 207738 AGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGG 207797
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248
|| || |||| | | | |||||||| |||||||| || | |||||
Sbjct 207798 ATCTTGGACTTGACATTGTCGATGGTATCGCTGGACTCCACCTCAAGGGTGAT 207850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429545123607083
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |