Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03-
24] 91 sequences; 28,360,408 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 6e-17
>seq1
Length=5488300
Score = 102 bits (112), Expect = 6e-17
Identities = 146/201 (73%), Gaps = 6/201 (3%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||||||||| || ||||| || || || ||||| |||||||| || || |
Sbjct 207377 ATGCAGATTTTCGTTAAGACACTCACCGGCAAGACTATCACACTCGAAGTCGAGTCGTCC 207318
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || ||| | || | |||||| || || || || | || || |||||
Sbjct 207317 GACACTATCGATAATGTGAAGTC-CAAAATTCAAGATAAGGAGGGCATTCCCCCCGATCA 207259
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTAC 23787
||||| | || || || ||||| || || ||||| | || |||||| |||||||
Sbjct 207258 GCAGCGCCTTATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTTT--CCGATTAC 207201
Query 23788 AACATACAAAAAGAGTCCACA 23808
|| || || || || ||||||
Sbjct 207200 AATATCCAGAAGGAATCCACA 207180
Score = 95.1 bits (104), Expect = 8e-15
Identities = 143/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680
|||| || ||||| || ||||| || ||||| || || || || || | ||||| | |
Sbjct 207595 TCGTCAAGACCCTGACTGGAAAGACCATCACCCTTGAGGTCGAGTCATCTGACACCATCG 207536
Query 23681 A-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTA 23739
| || |||| | || | || ||||| || || | || || || || ||||| |
Sbjct 207535 ACAACGTTAAGTCCAAGA-TTCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCCTT 207477
Query 23740 ATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAA 23799
|| || |||||||| || ||||| |||| ||| ||| | ||| |||||||| ||||||
Sbjct 207476 ATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAACATTCAAAAA 207417
Query 23800 GAGTCCACATTACATTTAGTT 23820
|||||||| | || || |||
Sbjct 207416 GAGTCCACTCTGCACTTGGTT 207396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009225126228
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |