Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03-
24] 91 sequences; 28,360,408 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 1e-31
seq5 100 7e-16
seq40 93.3 1e-13
seq7 89.7 1e-12
>seq1
Length=5488300
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||| |||||||| || |||| ||||||||||| | || | ||||||
Sbjct 207166 AGGACAAGGTGGAGTGTGGATTCCTTCTGGATATTGTAATCGGAAAGTGTACGGCCATCT 207225
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || ||||||||||| || || || ||||| ||||| || ||||| |||
Sbjct 207226 TCAAGCTGCTTGCCTGCGAAGATAAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTATCT 207285
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| || || ||||||| ||||| ||||| || | || || || | ||||| |||
Sbjct 207286 TGAATTTTGGACTTCACATTATCGATAGTGTCGGACGACTCGACTTCGAGTGTGATAGTC 207345
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | || || | ||| | |||||
Sbjct 207346 TTGCCGGTGAGTGTCTTAACGAAAATCTGCAT 207377
Score = 127 bits (140), Expect = 5e-24
Identities = 142/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| |||||||| |||||||| | ||||| |||| || ||| | || ||
Sbjct 207394 AGAACCAAGTGCAGAGTGGACTCTTTTTGAATGTTGTAGTCGGACAGAGTACGTCCGTCC 207453
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || ||||||||||| || || ||||| || ||||| || ||||||||
Sbjct 207454 TCCAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 207513
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || ||||||||||| || | || || || | ||||| |||
Sbjct 207514 TGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCGACCTCAAGGGTGATGGTC 207573
Query 225682 TTGCCCGTCA 225691
|| || ||||
Sbjct 207574 TTTCCAGTCA 207583
Score = 125 bits (138), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || || ||||| || ||| || || |||| ||||| || | | ||
Sbjct 206928 ACGCAGACGCAACACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGTGT 206987
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| |||||||||||||| || || ||||| || || |||||
Sbjct 206988 ACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGGATACC 207047
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| || ||||| ||| || || |||||||||||| | || || || |
Sbjct 207048 CTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAG 207107
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||| ||||| || |||||||| || | || | ||||||
Sbjct 207108 CGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAAATTTGCAT 207149
>seq5
Length=2122312
Score = 100 bits (110), Expect = 7e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || || || || || |||| |||||||| | | ||| | |||||
Sbjct 1613488 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCC 1613547
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || || ||||| || |||||||| |||||||||
Sbjct 1613548 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCT 1613607
>seq40
Length=6124
Score = 93.3 bits (102), Expect = 1e-13
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 7566 TATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGG 7625
||||||||| || ||||| | | ||||||||||| | |||||||| | | || ||
Sbjct 3431 TATTATTACAGCACATGCTATCTTAATGATTTTCTTCATGGTTATGCCTGCATTAATTGG 3372
Query 7626 CGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAG 7685
||||| || |||| || | || ||| | |||| | ||| |||||||| || || ||
Sbjct 3371 AGGTTTTGGTAATTTCTTATTACCATTACTAGTTGGAGGTCCAGATATGGCATTCCCTAG 3312
Query 7686 GCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731
| || |||||||||||||||||| || ||| |||||| ||
Sbjct 3311 ATTAAATAATATAAGTTTTTGATTATTAGTTCCTAGTTTATTTTTA 3266
Score = 87.8 bits (96), Expect = 4e-12
Identities = 81/101 (80%), Gaps = 4/101 (4%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729
||||||||| || || ||||||||||||||||| ||||| |||||||| || || ||
Sbjct 2873 TTCAGGATGTCCGAAGAATCAGAATAAATGTTGGAATAAA--ATAGGATCACCACCTCCA 2930
Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770
| | ||||| || ||||||||| ||||||||||||||
Sbjct 2931 GCTACTTCAAAGAATGAAGTATTAAAGTTTCTATCAGTTAA 2971
>seq7
Length=1586650
Score = 89.7 bits (98), Expect = 1e-12
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| ||| || || | ||||| || |||||||| || ||||||||
Sbjct 836225 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 836284
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || ||||| || ||||| || |||||||| ||| || |||
Sbjct 836285 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 836344
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|||||||| | || || || | || || ||||| ||||||| || || | |||
Sbjct 836345 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 836403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192529809583154
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |