Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 152 1e-31 seq5 100 7e-16 seq40 93.3 1e-13 seq7 89.7 1e-12 >seq1 Length=5488300 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| |||||||| || |||| ||||||||||| | || | |||||| Sbjct 207166 AGGACAAGGTGGAGTGTGGATTCCTTCTGGATATTGTAATCGGAAAGTGTACGGCCATCT 207225 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||||||||| || || || ||||| ||||| || ||||| ||| Sbjct 207226 TCAAGCTGCTTGCCTGCGAAGATAAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTATCT 207285 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || ||||||| ||||| ||||| || | || || || | ||||| ||| Sbjct 207286 TGAATTTTGGACTTCACATTATCGATAGTGTCGGACGACTCGACTTCGAGTGTGATAGTC 207345 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 207346 TTGCCGGTGAGTGTCTTAACGAAAATCTGCAT 207377 Score = 127 bits (140), Expect = 5e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| |||||||| |||||||| | ||||| |||| || ||| | || || Sbjct 207394 AGAACCAAGTGCAGAGTGGACTCTTTTTGAATGTTGTAGTCGGACAGAGTACGTCCGTCC 207453 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||||||||| || || ||||| || ||||| || |||||||| Sbjct 207454 TCCAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 207513 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||||||||| || | || || || | ||||| ||| Sbjct 207514 TGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCGACCTCAAGGGTGATGGTC 207573 Query 225682 TTGCCCGTCA 225691 || || |||| Sbjct 207574 TTTCCAGTCA 207583 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || ||||| || ||| || || |||| ||||| || | | || Sbjct 206928 ACGCAGACGCAACACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGTGT 206987 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| |||||||||||||| || || ||||| || || ||||| Sbjct 206988 ACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGGATACC 207047 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||| || || |||||||||||| | || || || | Sbjct 207048 CTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAG 207107 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| ||||| || |||||||| || | || | |||||| Sbjct 207108 CGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAAATTTGCAT 207149 >seq5 Length=2122312 Score = 100 bits (110), Expect = 7e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| |||||||| | | ||| | ||||| Sbjct 1613488 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCC 1613547 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || |||||||| ||||||||| Sbjct 1613548 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCT 1613607 >seq40 Length=6124 Score = 93.3 bits (102), Expect = 1e-13 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 7566 TATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGG 7625 ||||||||| || ||||| | | ||||||||||| | |||||||| | | || || Sbjct 3431 TATTATTACAGCACATGCTATCTTAATGATTTTCTTCATGGTTATGCCTGCATTAATTGG 3372 Query 7626 CGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAG 7685 ||||| || |||| || | || ||| | |||| | ||| |||||||| || || || Sbjct 3371 AGGTTTTGGTAATTTCTTATTACCATTACTAGTTGGAGGTCCAGATATGGCATTCCCTAG 3312 Query 7686 GCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 | || |||||||||||||||||| || ||| |||||| || Sbjct 3311 ATTAAATAATATAAGTTTTTGATTATTAGTTCCTAGTTTATTTTTA 3266 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729 ||||||||| || || ||||||||||||||||| ||||| |||||||| || || || Sbjct 2873 TTCAGGATGTCCGAAGAATCAGAATAAATGTTGGAATAAA--ATAGGATCACCACCTCCA 2930 Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 | | ||||| || ||||||||| |||||||||||||| Sbjct 2931 GCTACTTCAAAGAATGAAGTATTAAAGTTTCTATCAGTTAA 2971 >seq7 Length=1586650 Score = 89.7 bits (98), Expect = 1e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 836225 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 836284 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || ||||| || ||||| || |||||||| ||| || ||| Sbjct 836285 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 836344 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || || || | || || ||||| ||||||| || || | ||| Sbjct 836345 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 836403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529809583154