Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq14 89.7 4e-13 seq7 87.8 1e-12 >seq14 Length=555456 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/196 (72%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 48495 TGACGGCAAGAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGA 48554 ||||| | |||| ||||||| || | || | ||| ||| | ||| |||| ||||| Sbjct 210499 TGACGACCTGAAGTTCGTCAAAGTTCGCATGCGTACCACCAAGATCCCTCAGATTGGTGA 210558 Query 48555 CAAGTTTGCGTC-CTTCACGGCGCAAAAGGGGACATGTGGAGCCGTCCTGACC--CAGGA 48611 ||||||||| || | |||||| || ||||| || ||| | ||| ||| ||||| Sbjct 210559 CAAGTTTGCCTCTCGTCACGGT-CAGAAGGGTACCATTGGTATCA-CCT-ACCGACAGGA 210615 Query 48612 GGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTT 48671 ||||||||| ||| ||| || || || ||||| || || || |||||||||||| | Sbjct 210616 GGACATGCCTTTCACTCGGGAAGGTGTTGTTCCCGATCTGATTATTAACCCCCACGCCAT 210675 Query 48672 TCCCTCCAGGATGACC 48687 ||| || | |||||| Sbjct 210676 TCCTTCTCGTATGACC 210691 >seq7 Length=1586650 Score = 87.8 bits (96), Expect = 1e-12 Identities = 170/251 (68%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 27444 |||||||| |||| || ||||||||| | || ||||||| ||| || ||| Sbjct 266534 GGGTTCCACGCGCTCATGATGATGCGACGATCGAAGGGGTTGTGAATGAGCTTGTGCACA 266475 Query 27445 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCT 27504 | | || ||||| || || ||| || | ||| ||| || | || ||||| Sbjct 266474 ACATCTTTGAGCTGGTCAACACCCTGACCGGTGTAATCTGCCTTGGCATCAACATACTCG 266415 Query 27505 GCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 27564 || || || |||| ||| ||||| |||||||| ||||| || || || ||||| | ||| Sbjct 266414 GCGCCAAAGTGCCGCCACTGGAATCCGTACACGGGTCCTAGATCGCCTTCTTCGCGGTGG 266355 Query 27565 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 27624 ||| ||| ||||| | ||| || | | || || ||||||||||||| | || Sbjct 266354 CCGAGGCCGGATTTGTCTAGAAACTCGCGGCTTCCATTTCCGTCCCAGATCTTGATTCCA 266295 Query 27625 TTCTCGGAGAG 27635 ||||||||| Sbjct 266294 GCCTCGGAGAG 266284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506790193421