Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 163 7e-35 seq7 113 1e-19 seq12 98.7 2e-15 >seq1 Length=5488300 Score = 163 bits (180), Expect = 7e-35 Identities = 149/188 (79%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | || ||||| || ||||| |||||||| || ||||||||| Sbjct 207146 CAAATTTTTGTCAAGACTTTGACCGGAAAGACCATCACGCTCGAGGTTGAGAGCTCAGAC 207087 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||||||||| || || |||||||| |||||||| Sbjct 207086 ACCATTGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAGCAG 207027 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || || ||| | || ||| | || || ||| || Sbjct 207026 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACACTTTCGGACTACAACATC 206967 Query 178104 CAAAAAGA 178111 || || || Sbjct 206966 CAGAAGGA 206959 Score = 152 bits (168), Expect = 1e-31 Identities = 155/201 (77%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || ||||| || |||||||| ||||| || || |||||||||| Sbjct 207595 TCGTCAAGACCCTGACTGGAAAGACCATCACCCTTGAGGTCGAGTCATCTGACACCATCG 207536 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | ||||| || |||||||||||||| || || || || || |||||||| || |||| Sbjct 207535 ACAACGTTAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCCTTA 207476 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||||||||| || ||||| || || ||| | ||||| |||| || ||| | ||||||| Sbjct 207475 TCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAACATTCAAAAAG 207416 Query 178111 AATCAACACTGCATCTTGTTT 178131 | || || ||||| |||| || Sbjct 207415 AGTCCACTCTGCA-CTTGGTT 207396 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || ||||| ||||| || || || ||| Sbjct 207374 CAGATTTTCGTTAAGACACTCACCGGCAAGACTATCACACTCGAAGTCGAGTCGTCCGAC 207315 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || || ||||| || || || || || || || || ||||| Sbjct 207314 ACTATCGATAATGTGAAGTCCAAAATTCAAGATAAGGAGGGCATTCCCCCCGATCAGCAG 207255 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| |||||||| | || ||| ||||||| || || Sbjct 207254 CGCCTTATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTTTCCGATTACAATATC 207195 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| ||||| || ||||| Sbjct 207194 CAGAAGGAATCCACACTCCACCTTGT 207169 >seq7 Length=1586650 Score = 113 bits (124), Expect = 1e-19 Identities = 141/192 (73%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 836404 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 836348 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| ||||| || || || || || || |||||||| || Sbjct 836347 CATCGACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCG 836288 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || |||||||| ||||| | || || ||| || ||| |||| Sbjct 836287 CCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 836228 Query 178106 AAAAGAATCAAC 178117 || | || ||| Sbjct 836227 GAAGGTATGAAC 836216 >seq12 Length=999707 Score = 98.7 bits (108), Expect = 2e-15 Identities = 238/355 (67%), Gaps = 14/355 (4%) Strand=Plus/Minus Query 214128 GTTTTTCTGGTTGCTTTT---GCGGCAAATGGCATCTTTGTATGCGATGAAAGGCATTCC 214184 ||| ||||||||||| || | |||| ||||| ||||| ||||| || | || Sbjct 267980 GTTCTTCTGGTTGCTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAACGGGTTACC 267924 Query 214185 CACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTT 214244 |||| ||||| | |||||| | ||| || | |||||||| | ||| Sbjct 267923 AGTCTCGGTCTGAGCCTCGAGAATGGCGTACCAAAGCTTCTGGGCCTTGATAGTCTTACG 267864 Query 214245 GGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATC 214304 | | | ||||| | |||||||| | || || | ||| || || |||||||||||| Sbjct 267863 GCCACGGCCCTCCTGCTCGTACTTCGCGTAGAGGGCCTCGAACTCATCACCGTAGACATC 267804 Query 214305 ATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCT 214364 | | || || |||||||||||||||||||| || |||| | || || || || | Sbjct 267803 AGCCAGGCCAGGAGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACGCG 267744 Query 214365 TTTCATGAAAAGGTCGGAAGTCCAGATTGCATAAAAAATCTCTCTGGCTCTCATAAGGTC 214424 ||||||||||| |||| ||||| | || || |||| || | ||| | || || Sbjct 267743 CTTCATGAAAAGATCGGGGGTCCACAAAGCGTAGAAAAGGTCACGGGCGC---GAACCTC 267687 Query 214425 ATCACCTCCC--GGTTTTTTCGC--GTCGACAAAGTCAAAGATATCAACGTGCCA 214475 || | | || |||| || ||| |||| || || |||| |||| ||||||| Sbjct 267686 CTC-CTTACCATGGTTCTTGCGCAAATCGAGGAACTCGAAGACATCAGCGTGCCA 267633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729796524654