Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24] 403 sequences; 23,940,802 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 2e-15 seq43 96.9 7e-15 >seq3 Length=1680607 Score = 98.7 bits (108), Expect = 2e-15 Identities = 270/412 (66%), Gaps = 39/412 (9%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 ||||||||| |||| ||| |||| || || |||||||| || || || || || || || Sbjct 409057 CTTCCTCATATGCTCTTCTACGGCCCCCCAGGAACAGGTAAAACATCCACAATTCTCGCC 408998 Query 254061 CTGGCCCGAACCCTGTTGGGC---GAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAAC 254117 || ||| | |||| || ||| | | | || | ||| | ||||| || || Sbjct 408997 CTCGCCAAATCCCTCTTCGGCCCCGCGCTGTACC---GCTCCCGCATTCTCGAACTCAAT 408941 Query 254118 GCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGA-CTT---------- 254166 || || || || || || | | | ||||||||||||| |||||| ||| Sbjct 408940 GCCTCCGATGAGCGAGGCATCGGCATCGTCCGCGACAAAGTCAAGAACTTCGCTCGTGCT 408881 Query 254167 ----TCTCCAAGA-------TGTCGATTTCGTCGTTCC------AACCCGGCTGTCCGCC 254209 ||||| || | |||| || ||| || || | ||| || || Sbjct 408880 CAGCTCTCCCAGCCTACAGGTCTCGACGCCG-CGTACCGCGAACAATACTCCTGCCCACC 408822 Query 254210 TTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCT 254269 ||||||| | | || || |||||||| |||| |||||| || || |||||||| || Sbjct 408821 TTTCAAGATTATCATTCTCGACGAGGCAGACAGCATGACCCAAGATGCACAGTCCGCACT 408762 Query 254270 CCGCCGAACGATGGAGACGCACTCCGTTG--TGACGCGTTTTTGCCTGGTGTGCAACTAC 254327 ||| | || ||||||||| || || | | ||||| || ||||| |||||||||||| Sbjct 408761 GCGCAGGACTATGGAGACGTACA--GTCGCATTACGCGCTTCTGCCTTGTGTGCAACTAC 408704 Query 254328 GTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 || | || |||| ||||| ||| ||| ||| ||||| || |||| Sbjct 408703 GTCACCCGCATTATCGAGCCGCTTGCTAGTCGTTGCAGTAAGTTCCGGTTCA 408652 Score = 95.1 bits (104), Expect = 3e-14 Identities = 257/386 (67%), Gaps = 7/386 (2%) Strand=Plus/Plus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 || ||||| || |||| |||||||||||| | || ||||||||||| | ||| Sbjct 1459844 TTTGCCATCTACCTGGAGCCCTGGCACGCCGATGTCTTCGAGTTCCTGGATCTTCGCAAG 1459903 Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396 ||| | || || ||| | |||| ||||| || ||||||| || ||| | ||||| Sbjct 1459904 AACCATGGTAAGGAGGAAGTTCGAGCTCGTGATCTTTTCTACGCTCTCTGGACCCCCGAC 1459963 Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCC 249456 ||||||||| || || ||||| |||| || ||||| ||| | | ||| ||| || Sbjct 1459964 TTGTTCATGAAGCGTGTTGAGGCCAACGGTGACTGGACTCTTTTCTGTCCCAACGAGGCT 1460023 Query 249457 CCGGACCTCATCGATCTACACGGCGCCGACTTCGACCAAGCCTATAAGAAATACGA-ATC 249515 || | | |||| | |||||| || || || ||| || ||||| | Sbjct 1460024 CCCGGTTTGGCCGATGTCTACGGCGAGGAGTTTGAGGCTCTGTATGAGCGCTACGAGAAG 1460083 Query 249516 CAACGGCATCG--GCAAGACAATCAAGGCTCGGACCCTTT-TTGCGAAGGTGGTGGAGTC 249572 || | | | | ||||||| |||||||||| || |||| | || | | ||| | Sbjct 1460084 GAAGGCCGTGGTCGCAAGACCATCAAGGCTCAGAAGCTTTGGTACG-CTATTCTCGAGGC 1460142 Query 249573 CCAGATAGAGACAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTA 249631 |||| ||||| || || | |||| | | ||| || || |||||| |||||| | Sbjct 1460143 TCAGACCGAGACTGGTAACCCCT-TTATGCTATACAAGGATGCTTGCAACCGCAAGAGCA 1460201 Query 249632 ACCAACGGCATCTTGGTACCATCCGC 249657 |||| | | ||||||||||||||| Sbjct 1460202 ACCAGAAGAACCTTGGTACCATCCGC 1460227 >seq43 Length=99683 Score = 96.9 bits (106), Expect = 7e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 254004 CCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTG 254063 || ||| | ||| || | || |||||||| || |||||||| || || | || ||||| Sbjct 30325 CCGCATCTCCTTCTCTATGGACCTCCCGGTACTGGCAAGACATCGACTGTTCTCGCGCTC 30266 Query 254064 GCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCT 254123 ||||| | | |||||| ||||||| | || ||| | ||||||||||| | Sbjct 30265 GCCCGGCGGATATACGGCGAGAAGAACATGCGGCAGATGGTGTTGGAGCTGAACGCCAGT 30206 Query 254124 GACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATT 254183 ||||| || || | ||||| || || || ||||||||||||| ||| |||| || | Sbjct 30205 GACGACCGTGGCATCGACGTTGTTCGAGAACAGATCAAGACTTTTGCCAGTATGTAGAGT 30146 Query 254184 TCGTCG 254189 |||||| Sbjct 30145 TCGTCG 30140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073760855674304