Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24]
403 sequences; 23,940,802 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq16 105 7e-18
seq9 89.7 5e-13
>seq16
Length=566148
Score = 105 bits (116), Expect = 7e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014
||||| || || | ||| | || | |||| || || || || || ||||||||||||
Sbjct 154275 TGGCCGCCACGCAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCG 154216
Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074
|| |||| ||| || || || || |||||| |||||||||| ||||| || |||
Sbjct 154215 GACAGAGTGCGACCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGA 154156
Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134
|| ||||| || ||||| ||| || || | | || | ||||| | | |||
Sbjct 154155 GGGATGCCCTCCTTGTCTTGAATCTTGCTCTTGACGTTGTCGATGGTGTCGCTAGATTCA 154096
Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| |||| ||| | ||||||||| |||| || || ||||| || ||||||
Sbjct 154095 ACCTCAAGAGTGATCGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCATA 154045
Score = 82.4 bits (90), Expect = 8e-11
Identities = 143/206 (69%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA--GTCTTCGAGTT 143039
|||| |||||||| || || |||||||| || | || | | || |||||||||||
Sbjct 154020 TGAAGGGTAGATTCCTTCTGGATGTTGTAGTC--TGATAGAGTACGGCCGTCTTCGAGTT 153963
Query 143040 GTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTT 143099
| || || ||| | || ||||| ||||| || || || || || |||||||| || |
Sbjct 153962 GCTTGCCGGCAAAAATAAGACGCTGCTGGTCCGGGGGAATTCCCTCTTTGTCTTGGATCT 153903
Query 143100 TTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGG 143159
| || | | || | || || | || || ||||||| || | ||||||||||
Sbjct 153902 TACTCTTCACGTTGTCGATGGTATCGGAGGACTCGACTTCAAGCGTGATTGTCTTGCCGG 153843
Query 143160 TCAATGTTTTTACGAATATTTGCATA 143185
| | ||| || ||||| || ||||||
Sbjct 153842 TGAGTGTCTTAACGAAGATCTGCATA 153817
>seq9
Length=753222
Score = 89.7 bits (98), Expect = 5e-13
Identities = 295/448 (66%), Gaps = 17/448 (4%)
Strand=Plus/Plus
Query 50416 CGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATA 50475
||| | || || ||||| ||||| ||| | || || ||||| ||||| | ||
Sbjct 519821 CGTCTGGTTGCCTTTGCTTGCGTTGAGGGTATCTTCTTCTCCGGCTCTTTTGCCTCTATC 519880
Query 50476 TTTTACATTAA-AACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTC 50534
|||| | || || | | ||| | ||||||||||| || || |||||| |||| ||
Sbjct 519881 TTTTGGCTCAAGAAGCGT-GGCCTGATGCCCGGCCTGACCTTCTCTAACGAGCTGATCTC 519939
Query 50535 GCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGA 50594
||| || || || |||||||| |||||||| || ||| | | | | | | |||
Sbjct 519940 GCGTGATGAGGGCATGCACACCGACTTTGCCTGCTTG-----CTTTTCTCCC--ACTTGA 519992
Query 50595 AAAATTATCATACGAAACA-ATTTT---GGACATGTTCAAAGAAGCCGTCGACATCGAAA 50650
| || || | || || | ||| || | |||||||||| ||| ||
Sbjct 519993 ACAACCGTCCCAGCCCCCAGATGGTCGAGGATATCGTTGTTGAAGCCGTCGGCATTGAGC 520052
Query 50651 AAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGT 50710
| ||||| | | |||||| | ||| || | | || ||||| || | ||||||
Sbjct 520053 AGGAGTTCCTGTCTGACGCTCTGCCCTGCGCCCTCCTTGGTATGAATGCCAAGCTGATGT 520112
Query 50711 GCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGGACAAC-CGAAATAC 50769
|| ||||||||||||| || || ||| | ||||| | || || |||| ||| |||
Sbjct 520113 GCCAGTACATTGAGTTCGTCGCCGACCGTCTGTTGGTCGCCCTCGG-CAACAAGAAGTAC 520171
Query 50770 TATAATG-CACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAA 50828
|| |||| |||| |||||||| || ||| | ||| || ||| ||||| || ||
Sbjct 520172 TACAATGCCACG-AACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAA 520230
Query 50829 CTTTTTCGAAAGACGTGTAGGCGAATAC 50856
||| ||||| | ||||| || || |||
Sbjct 520231 CTTCTTCGAGAAGCGTGTTGGTGACTAC 520258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507011845914960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |