Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24] 403 sequences; 23,940,802 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq16 105 7e-18 seq9 89.7 5e-13 >seq16 Length=566148 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 ||||| || || | ||| | || | |||| || || || || || |||||||||||| Sbjct 154275 TGGCCGCCACGCAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCG 154216 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 || |||| ||| || || || || |||||| |||||||||| ||||| || ||| Sbjct 154215 GACAGAGTGCGACCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGA 154156 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || ||||| || ||||| ||| || || | | || | ||||| | | ||| Sbjct 154155 GGGATGCCCTCCTTGTCTTGAATCTTGCTCTTGACGTTGTCGATGGTGTCGCTAGATTCA 154096 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || |||| ||| | ||||||||| |||| || || ||||| || |||||| Sbjct 154095 ACCTCAAGAGTGATCGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCATA 154045 Score = 82.4 bits (90), Expect = 8e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA--GTCTTCGAGTT 143039 |||| |||||||| || || |||||||| || | || | | || ||||||||||| Sbjct 154020 TGAAGGGTAGATTCCTTCTGGATGTTGTAGTC--TGATAGAGTACGGCCGTCTTCGAGTT 153963 Query 143040 GTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTT 143099 | || || ||| | || ||||| ||||| || || || || || |||||||| || | Sbjct 153962 GCTTGCCGGCAAAAATAAGACGCTGCTGGTCCGGGGGAATTCCCTCTTTGTCTTGGATCT 153903 Query 143100 TTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGG 143159 | || | | || | || || | || || ||||||| || | |||||||||| Sbjct 153902 TACTCTTCACGTTGTCGATGGTATCGGAGGACTCGACTTCAAGCGTGATTGTCTTGCCGG 153843 Query 143160 TCAATGTTTTTACGAATATTTGCATA 143185 | | ||| || ||||| || |||||| Sbjct 153842 TGAGTGTCTTAACGAAGATCTGCATA 153817 >seq9 Length=753222 Score = 89.7 bits (98), Expect = 5e-13 Identities = 295/448 (66%), Gaps = 17/448 (4%) Strand=Plus/Plus Query 50416 CGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATA 50475 ||| | || || ||||| ||||| ||| | || || ||||| ||||| | || Sbjct 519821 CGTCTGGTTGCCTTTGCTTGCGTTGAGGGTATCTTCTTCTCCGGCTCTTTTGCCTCTATC 519880 Query 50476 TTTTACATTAA-AACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTC 50534 |||| | || || | | ||| | ||||||||||| || || |||||| |||| || Sbjct 519881 TTTTGGCTCAAGAAGCGT-GGCCTGATGCCCGGCCTGACCTTCTCTAACGAGCTGATCTC 519939 Query 50535 GCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGA 50594 ||| || || || |||||||| |||||||| || ||| | | | | | | ||| Sbjct 519940 GCGTGATGAGGGCATGCACACCGACTTTGCCTGCTTG-----CTTTTCTCCC--ACTTGA 519992 Query 50595 AAAATTATCATACGAAACA-ATTTT---GGACATGTTCAAAGAAGCCGTCGACATCGAAA 50650 | || || | || || | ||| || | |||||||||| ||| || Sbjct 519993 ACAACCGTCCCAGCCCCCAGATGGTCGAGGATATCGTTGTTGAAGCCGTCGGCATTGAGC 520052 Query 50651 AAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGT 50710 | ||||| | | |||||| | ||| || | | || ||||| || | |||||| Sbjct 520053 AGGAGTTCCTGTCTGACGCTCTGCCCTGCGCCCTCCTTGGTATGAATGCCAAGCTGATGT 520112 Query 50711 GCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGGACAAC-CGAAATAC 50769 || ||||||||||||| || || ||| | ||||| | || || |||| ||| ||| Sbjct 520113 GCCAGTACATTGAGTTCGTCGCCGACCGTCTGTTGGTCGCCCTCGG-CAACAAGAAGTAC 520171 Query 50770 TATAATG-CACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAA 50828 || |||| |||| |||||||| || ||| | ||| || ||| ||||| || || Sbjct 520172 TACAATGCCACG-AACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAA 520230 Query 50829 CTTTTTCGAAAGACGTGTAGGCGAATAC 50856 ||| ||||| | ||||| || || ||| Sbjct 520231 CTTCTTCGAGAAGCGTGTTGGTGACTAC 520258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507011845914960