Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24]
403 sequences; 23,940,802 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq16 123 6e-23
seq9 86.0 1e-11
>seq16
Length=566148
Score = 123 bits (136), Expect = 6e-23
Identities = 131/173 (76%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || ||||| ||||| || ||||| |||||||| | |||||||| ||||| || ||
Sbjct 153505 GTTGACTCTTTTTGAATGTTGTAGTCGGATAGAGTACGGCCGTCTTCAAGTTGCTTGCCG 153446
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || || ||||| ||||| || || ||||||||||| | ||
Sbjct 153445 GCGAAGATCAGACGCTGCTGGTCGGGAGGAATTCCCTCCTTGTCCTGAATCTTCGACTTG 153386
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
||||| || | ||| ||||| | || ||||| || || |||||||| || ||
Sbjct 153385 ACATTGTCGATGGTGTCGCTGGACTCCACCTCGAGGGTGATAGTCTTTCCTGT 153333
>seq9
Length=753222
Score = 86.0 bits (94), Expect = 1e-11
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
||||| ||||| || || ||||| ||||| || || ||||||||| |||||||||||
Sbjct 519827 GTTGCCTTTGCTTGCGTTGAGGGTATCTTCTTCTCCGGCTCTTTTGCCTCTATCTTTTGG 519886
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGAT 269247
| ||||| | ||||| ||||| || | || ||||||||||| ||||
Sbjct 519887 CTCAAGAAGCGTGGCCTGATGCCCGGCCTGACCTTCTCTAACGAGCTGAT 519936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151392454826324
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |