Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24]
403 sequences; 23,940,802 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq18 190 3e-44
seq1 176 7e-40
>seq18
Length=448829
Score = 190 bits (210), Expect = 3e-44
Identities = 201/262 (77%), Gaps = 2/262 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| |||| ||||| | || || |||||||| || ||||||||||| || |
Sbjct 130731 CGCTAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCCA 130673
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| ||||| |||||||| ||||||||| |||| | || |||| || ||||
Sbjct 130672 TCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAGGAGA 130613
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | |||| ||||||| || |||| |||| ||| || || || ||||
Sbjct 130612 CCCGCGGTGTCCTCAAGACCTTCCTCGAGTCCGTCATCCGTGACGCCGTCACTTACACCG 130553
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || |||||||||||||| |||| | ||||| || | || || || |
Sbjct 130552 AGCACGCCAAGCGCAAGACTGTCACCTCGCTGGACGTTGTCTACGCTCTCAAGCGCCAGG 130493
Query 16671 GCCGTAAGATTTATGGTTTTGG 16692
|||||| | |||||||| ||
Sbjct 130492 GCCGTACCTTGTATGGTTTCGG 130471
>seq1
Length=1870422
Score = 176 bits (194), Expect = 7e-40
Identities = 202/269 (75%), Gaps = 2/269 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||||| | || || ||||| || || ||||||||||| ||||
Sbjct 1369335 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATTCAGGGTATCACCAAGCCCGCTA 1369393
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| |||||||||||||| ||||||||| |||| | || |||| || ||||
Sbjct 1369394 TCCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 1369453
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | |||| ||||||| || || |||| ||| ||| || || || |
Sbjct 1369454 CCCGCGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACATACACTG 1369513
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| |||||||| | || ||||||| || | || || || |
Sbjct 1369514 AGCACGCCAAGCGCAAGACCGTCACCTCTCTCGACGTCGTCTACGCTCTCAAGCGCCAGG 1369573
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||||| | || ||||| || |||||
Sbjct 1369574 GCCGTACCCTCTACGGTTTCGGTGGTTAA 1369602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074831534279
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |