Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24] 403 sequences; 23,940,802 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 116 3e-21 seq16 114 1e-20 >seq3 Length=1680607 Score = 116 bits (128), Expect = 3e-21 Identities = 449/690 (65%), Gaps = 29/690 (4%) Strand=Plus/Minus Query 139333 TCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCG 139392 || |||||| | || | | | || || || || ||||| | || | ||| | ||| Sbjct 1460049 TCGCCGTAGACATCGGCCAAACCGGGAGCCTCGTTGGGACAGAAAAGAGTCCAGTCACCG 1459990 Query 139393 TTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGC 139452 || |||| || ||| ||||||||| || || |||| | |||| | | | ||| || Sbjct 1459989 TTGGCCTCAACACGCTTCATGAACAAGTCGGGGGTCCAGAGAGCGTAGAAAAGATCACGA 1459930 Query 139453 GCCTTCTTA--TCTTCCGAACCCATGTTACGTTTCATGTTA-AGGAAATCAAAAACGTCA 139509 || || | || ||| ||| ||| | | | | | | ||||| || || || || Sbjct 1459929 GC--TCGAACTTCCTCCTTACC-ATGGTTCTTGCGAAGATCCAGGAACTCGAAGACATCG 1459873 Query 139510 GCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCG 139566 |||||||| || ||||| |||||||| | || || || ||| ||||| || || Sbjct 1459872 GCGTGCCAGGGCTCCAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCC 1459813 Query 139567 ACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCG 139626 |||| || ||| || ||| | || |||| | ||| | | |||| | | |||||| Sbjct 1459812 ACGTAGCGGGCAGTGTTGTTGTACACCCGCAGGAGCGGGACAATACCGTTGGAGGTTCCG 1459753 Query 139627 TTGGTGCTACGGATG--GGA-CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATT 139683 ||||| | || ||| ||| | | || || |||| || ||||| | || || Sbjct 1459752 TTGGTTCCACCAATGTAGGAGCCGGTG---GCGCGGATACGGTGAACATTAAGACCAATA 1459696 Query 139684 CCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTAT 139742 || || || || || || | | || || | | || || || |||||| || Sbjct 1459695 CCACCAGCAGTCTTTGAAATCATGGCACAGGTCTTG-AGGGTGTCATAGATACCTTCAAT 1459637 Query 139743 GCTGTCGTCCTGCA-TCGTG---ACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGC 139798 |||||| |||| || || ||||| ||||| || | || || || | || | Sbjct 1459636 GCTGTC----TGCACTCATGTCCACCAGGAAGCAGGAGGCCAGCTGGGGCTGGGGGGTAC 1459581 Query 139799 CGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACG 139858 |||| ||| || || || || || || || | | |||||||| | ||| | Sbjct 1459580 CGGCGTTAAAGAGGGTGGGGGAAGCATGAGTAAAGTACTTCTGGGACATCAAGTGGTAGG 1459521 Query 139859 TTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATAT 139918 | |||||||| || |||||||| ||||||||||| || ||||| |||||||||| | Sbjct 1459520 TCTCGATGGCCTTCTCAATATCCTCGCCGTGGATACCAACGGAGACACGCATCAGCAGGT 1459461 Query 139919 GTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGT 139976 |||| || ||||| ||| ||| ||||| ||||| |||| ||| ||||| Sbjct 1459460 GTTGAGGACGCTCGGCAACCTTGCCGTCGATCCGCAGGAGATATGACCG--CTCCAGGGT 1459403 Query 139977 CTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 |||| |||| ||||| | |||||||| || Sbjct 1459402 CTTGAAGCCGAAGTAGTTGTAGTTGAAGTC 1459373 >seq16 Length=566148 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || ||| | | | Sbjct 154046 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACGATCACTCTTGAGGTTGAATCTAGC 154105 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| || || || ||||| || || Sbjct 154106 GACACCATCGACAACGTCAAGAGCAAGATTCAAGACAAGGAGGGCATCCCTCCTGACCAG 154165 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||||||||| || || ||||||||||| | | |||| ||||| ||| Sbjct 154166 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGACGGTCGCACTCTGTCCGATTACAAC 154225 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||| ||||| | || |||| || ||| Sbjct 154226 ATCCAGAAGGAGTCCACTCTTCACCTGGTGCTCCGTCTGCGTGGCGGC 154273 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || ||||| || || || ||||| ||||| || || || Sbjct 153818 ATGCAGATCTTCGTTAAGACACTCACCGGCAAGACAATCACGCTTGAAGTCGAGTCCTCC 153877 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||||||||||||||| ||||| || || || || Sbjct 153878 GATACCATCGACAACGTGAAGAGTAAGATCCAAGACAAAGAGGGAATTCCCCCGGACCAG 153937 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || |||||||| || || || || || | | | ||||| || ||| Sbjct 153938 CAGCGTCTTATTTTTGCCGGCAAGCAACTCGAAGACGGCCGTACTCTATCAGACTACAAC 153997 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || |||||||| || || ||| Sbjct 153998 ATCCAGAAGGAATCTACCCTTCAC 154021 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || || || ||||| || ||||| || || ||| |||||| | || | || || Sbjct 153333 ACAGGAAAGACTATCACCCTCGAGGTGGAGTCCAGCGACACCATCGACAATGTCAAGTCG 153392 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| || ||||| |||||||| || || ||| ||||||| ||||| || Sbjct 153393 AAGATTCAGGACAAGGAGGGAATTCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGCAAG 153452 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || || || || | | | || || || ||||||||||| || || || || ||| Sbjct 153453 CAACTTGAAGACGGCCGTACTCTATCCGACTACAACATTCAAAAAGAGTCAACCCTGCAC 153512 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 | || |||| ||||| || || Sbjct 153513 CTCGTCCTGCGCTTGCGTGGTGG 153535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895333640840