Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24] 403 sequences; 23,940,802 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq9 116 6e-20 seq3 116 6e-20 seq23 111 2e-18 seq13 102 1e-15 >seq9 Length=753222 Score = 116 bits (128), Expect = 6e-20 Identities = 176/245 (72%), Gaps = 8/245 (3%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 520274 TGACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 520215 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| ||||||| | ||| ||||| | | ||||| ||||| | |||| Sbjct 520214 GGGAGATGGACTCCATGAAGTCGAAGGGGTTCGTGGCATTGTAGTACTTCTTGTTGCCGA 520155 Query 794011 G--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 | |||| ||| ||| |||||||||||||| ||||||||||||||||| || ||| || Sbjct 520154 GGGCGAC-CAA-CAGACGGTCGGCGACGAACTCAATGTACTGGCACATCAGCTTGGCATT 520097 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA--AACTCTTTCTCGATCTCGACG 794126 ||| || | ||| || |||||| | | | |||| ||||| | ||| || ||||| Sbjct 520096 CATACCAAGGAGGGCGCAGGGCAGAGCGT--CAGACAGGAACTCCTGCTCAATGCCGACG 520039 Query 794127 GCCTC 794131 || || Sbjct 520038 GCTTC 520034 Score = 91.5 bits (100), Expect = 2e-12 Identities = 117/158 (74%), Gaps = 9/158 (6%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAG 794433 ||||||||||| ||||| |||||||||||||||||||| |||| ||| ||| ||| Sbjct 519915 AGGCCGGGCATCAGGCCACGCTTCTTGAGCCAAAAGATAGAGGCA---AAAGAGCCGGAG 519859 Query 794434 AAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCC 794493 || ||||| ||||| ||| |||||| | || || |||| || || ||| || | Sbjct 519858 AAGAAGATACCCTCAACGCAAGCAAAGGCAACCAGACGCTGAGCGAA--GGTCGAGTTGC 519801 Query 794494 TCTTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTT 794531 | | |||||||||| || ||||| || ||||| || Sbjct 519800 GGTCAG-TGATCCACTTGATGGCCCATTCGGCCTTCTT 519764 Score = 89.7 bits (98), Expect = 8e-12 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| ||||||||| ||||| || ||||||||||| ||||| ||||| || || Sbjct 519655 GGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGGAGTGAATGTTCTCCATC 519596 Query 794644 GCGATCTGGAAGCCATAAAAGCAG 794667 |||||||||||| || |||||| Sbjct 519595 ATGATCTGGAAGCCGTAGAAGCAG 519572 >seq3 Length=1680607 Score = 116 bits (128), Expect = 6e-20 Identities = 286/437 (65%), Gaps = 12/437 (3%) Strand=Plus/Minus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631 ||| || || ||| ||||||||||||| || || |||| || ||||||| |||||| Sbjct 1460258 ACTCGATGATCTCAGTGCACAGGTTGGA--ACTGCGGATGGTACCAAGGTTCTTCTGGTT 1460201 Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691 ||| | ||||| || ||||||| ||||| |||| ||| |||||| |||| || Sbjct 1460200 GCTCTTGCGGTTGCAAGCATCCTTGTATAGCATAAAGGGGTTACCAGTCTCGGTCTGAGC 1460141 Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCCT 2071747 | || || || |||||| || | || || | || ||| ||||| | Sbjct 1460140 CTCGAGAATAGCGTACCAAA----GCTTCTGAGCCTTGATGGTCTTGCGACCACGGCCTT 1460085 Query 2071748 NNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGG 2071807 | || || ||||| | |||||| | ||| || |||| Sbjct 1460084 CCTTCTCGTAGCGCTCATACAGAGCCTCAAACTCCTCGCCGTAGACATCGGCCAAACCGG 1460025 Query 2071808 GCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACA 2071867 | |||||| || || || || | |||||| ||| | | | || || ||| |||| Sbjct 1460024 GAGCCTCGTTGGGACAGAAAAGAGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACA 1459965 Query 2071868 GGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 2071927 |||| ||||| || |||| || ||||| || || || |||||||| || |||| Sbjct 1459964 AGTCGGGGGTCCAGAGAGCGTAGAAAAGATCACGAGCTCGAACTTCCTCCTTACCATGGT 1459905 Query 2071928 TCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 2071987 |||| || || || | |||| || ||||||||||| |||||||||||| ||||| Sbjct 1459904 TCTTGCGAAGATCCAGGAACTCGAAGACATCGGCGTGCCAGGGCTCCAGGTAGATGGCAA 1459845 Query 2071988 AGGCGCCCTTGCGCTTG 2072004 |||| || ||||||| Sbjct 1459844 AGGCACCAGGGCGCTTG 1459828 >seq23 Length=371914 Score = 111 bits (122), Expect = 2e-18 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||| |||||||||||||| ||| ||||||| || | || || ||||| || || ||| Sbjct 150549 GCCGCGAACTACCTCGACATTAAGGCCCTCCTGGACGTCGGCTGTAAGACGGTCGCAAAC 150608 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | ||||||||||||||||| ||||| ||||| ||||| || |||||| || Sbjct 150609 ATGATCAAGGGCAAGTCGCCTGAGGAGATCCGGAAGACGTTCAACATCCAG 150659 >seq13 Length=614595 Score = 102 bits (112), Expect = 1e-15 Identities = 122/163 (75%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| ||||| || ||||||||| |||| || || ||| | | Sbjct 13603 GTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCGAGCTCACCGGGGAG 13662 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| ||||| || | |||||||||||| |||| ||| ||| |||||| || | Sbjct 13663 GATGAGGCGGACCGAGGTCTGGATCTCCCGGGAAGAGATGGTGGACTTCTTGTT-GTAGG 13721 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632 | || || | |||||||||| | | ||| |||| ||||| Sbjct 13722 CAGCAAGCTTGGAGGCCTCGGTGGCAACGCGCTCGAAGATGTC 13764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916203531051917