Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24]
403 sequences; 23,940,802 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq9 104 2e-17
seq16 84.2 2e-11
>seq9
Length=753222
Score = 104 bits (114), Expect = 2e-17
Identities = 329/502 (66%), Gaps = 11/502 (2%)
Strand=Plus/Plus
Query 46772 CAAAAAGGCCCAGTGGGCCATGAAGTGGATCGA-GAGCGAGACCGCCACGCTGGCCGAGC 46830
||| |||||| | |||||||| ||||||||| || || || | || | || |||
Sbjct 519763 CAAGAAGGCCGAATGGGCCATCAAGTGGATCACTGACCGCAACT-CGACCTTCGCTCAGC 519821
Query 46831 GCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTT 46890
| |||| || || || || || || | || || || ||| ||||||| | || |
Sbjct 519822 GTCTGGTTGCCTTTGCTTGCGTTGAGGGTATCTTCTTCTCCGGCTCTTTTGCCTCTATCT 519881
Query 46891 TTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGC 46950
||| | || | ||| | ||||| |||||||| ||| ||||||| |||||||||
Sbjct 519882 TTTGGCTCAAGAAGCGTGGCCTGATGCCCGGCCTGACCTTCTCTAACGAGCTGATCTCGC 519941
Query 46951 GCGACGAAGGACTACACACGGACTTTGCGTGTCTCTATTACAAGACGCGCGTGAATGAGA 47010
| || || || | ||||| |||||||| || | || | | | | |||| |
Sbjct 519942 GTGATGAGGGCATGCACACCGACTTTGCCTGCTTGCTTTTCT---CCCACTTGAACAACC 519998
Query 47011 AATTAAACTCGGACACGATCCTGAGCATGT--TTAGGGAGGCGGTGAGCATCGAAAAGGA 47068
| | | | | | || ||| || | || || || || |||| || ||||
Sbjct 519999 GTCCCAGCCCCCAGATGGTC--GAGGATATCGTTGTTGAAGCCGTCGGCATTGAGCAGGA 520056
Query 47069 GTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCTATGTGCGA 47128
||| | ||| || |||||| |||| | || || ||||| || || |||||| |
Sbjct 520057 GTTCCTGTCTGACGCTCTGCCCTGCGCCCTCCTTGGTATGAATGCCAAGCTGATGTGCCA 520116
Query 47129 ATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAAC-CGAAATATTTTA 47187
|| |||||||| || || || ||||||||||| ||||| |||| ||| || | |
Sbjct 520117 GTACATTGAGTTCGTCGCCGACCGTCTGTTGGTCGCCCTCGG-CAACAAGAAGTACTACA 520175
Query 47188 ATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTT 47247
|||| || || || || || ||| | ||| || || | ||||| ||||| || |
Sbjct 520176 ATGCCACGAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCT 520235
Query 47248 TCGAGAAACGAGTCGGAGAGTA 47269
||||||| || || || || ||
Sbjct 520236 TCGAGAAGCGTGTTGGTGACTA 520257
>seq16
Length=566148
Score = 84.2 bits (92), Expect = 2e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||||||||| || | || | | |||||||||||||||||||||||||| | ||
Sbjct 153530 ACGCAAGCGCAGGACGAGGTGCAGGGTTGACTCTTTTTGAATGTTGTAGTCGGATAGAGT 153471
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
||| ||||| || || || |||| |||| |||||||| || || ||||| || ||
Sbjct 153470 ACGGCCGTCTTCAAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAATTCC 153411
Query 132022 TTCTTTATC 132030
|| || ||
Sbjct 153410 CTCCTTGTC 153402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476608799071080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |