Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24] 403 sequences; 23,940,802 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 109 8e-18 seq9 104 3e-16 seq1 98.7 1e-14 >seq3 Length=1680607 Score = 109 bits (120), Expect = 8e-18 Identities = 199/289 (69%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 259895 ATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 ||||| ||| ||| || || ||| || | ||||| |||||||| ||||| || || | Sbjct 1459532 ATGTCCCAGAAGTACTTTAC-TCATGCTTCCCCCACCCTCTTTAACGCCGGTACCCCCCA 1459590 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 || ||| | || ||||| ||| ||||||||| || || || || || ||||| Sbjct 1459591 GCCCCAGCTGGCCTCCTGCTTCCTGGTGGACATGAGTGCAGACAGCATTGAAGGTATCTA 1459650 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 |||||| |||||| || || | || || ||| | || || || || ||| || | Sbjct 1459651 TGACACCCTCAAGACCTGTGCCATGATTTCAAAGACTGCTGGTGGTATTGGTCTTAATGT 1459710 Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133 ||| | |||||| | ||| ||||| | | || |||||||| |||||||| | Sbjct 1459711 TCACCGTATCCGCGCCACCGGCTCCTACATTGGTGGAACCAACGGAACCTCCAACGGTAT 1459770 Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 ||| || | || || || | ||| |||| || |||||||| |||||| Sbjct 1459771 TGTCCCGCTCCTGCGGGTGTACAACAACACTGCCCGCTACGTGGACCAG 1459819 Score = 102 bits (112), Expect = 1e-15 Identities = 287/441 (65%), Gaps = 14/441 (3%) Strand=Plus/Plus Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855 ||||||| || ||||||||| ||||||||| || ||||||||||| || || | | Sbjct 1459828 CAAGCGCCCTGGTGCCTTTGCCATCTACCTGGAGCCCTGGCACGCCGATGTCTTCGAGTT 1459887 Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915 ||||| || |||||||| || || |||| ||| | || || ||||| || Sbjct 1459888 CCTGGATCTTCGCAAGAACCATGGTAA-GGAG-----GAAGTTCGAGCTCGTGATCTTTT 1459941 Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975 |||| || ||||| |||| |||| ||| || | | | || | | |||||| | Sbjct 1459942 CTACGCTCTCTGGACCCCCGACTTGTTCATGAAGCGTGTTGAGGCCAACGGTGACTGGAC 1460001 Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035 || || || || |||||| ||||| || ||| ||| |||| || ||||| || Sbjct 1460002 TCTTTTCTGTCCCAACGAGGCTCCCGGTTTGGCCGATGTCTACGGCGAGGAGTTTGAGGC 1460061 Query 262036 CCTCTATGA--GNNNNNNNNNNNNNNNNNNNNNNCGC-GGACCGTCGTGCCCGCACGACA 262092 || ||||| | ||| |||| || | || | | Sbjct 1460062 TCTGTATGAGCGCTACGAGAAGGAAGGCCGTGGTCGCAAGACCATCAAG---GCTCAGAA 1460118 Query 262093 GATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAA 262152 | | |||| || ||| ||| ||| || | |||||| || | |||| ||| | ||||| Sbjct 1460119 GCTTTGGTACGCTATTCTCGAGGCTCAGACCGAGACTGGTAACCCCTTTATGCTATACAA 1460178 Query 262153 GGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAGAGGCCAACC 262211 ||| || ||||| | ||||||||| ||||||| || |||| | ||| |||||| Sbjct 1460179 GGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATCCGCAG-TTCCAACC 1460237 Query 262212 TGTGCACCGAGATCGTCCAGT 262232 ||||||| |||||| || ||| Sbjct 1460238 TGTGCACTGAGATCATCGAGT 1460258 >seq9 Length=753222 Score = 104 bits (114), Expect = 3e-16 Identities = 119/156 (76%), Gaps = 7/156 (4%) Strand=Plus/Plus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGC--CTCGACACTTTGCCGA 1456180 || |||||||| ||||| || |||||||||| || || |||||| ||| || | Sbjct 519764 AAGAAGGCCGAATGGGCCATCAAGTGGATCACT---GACCGCAACTCGAC-CTTCGCTCA 519819 Query 1456181 GCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCAT 1456239 ||| || || | |||||| |||| ||||| ||||| ||||| ||| ||| | | || Sbjct 519820 GCGTCTGGTTGCCTTTGCTTGCGTTGAGGGTATCTTCTTCTCCGGCTCTTTTGCCTCTAT 519879 Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||||||||| ||||| |||||||| || Sbjct 519880 CTTTTGGCTCAAGAAGCGTGGCCTGATGCCCGGCCT 519915 Score = 104 bits (114), Expect = 3e-16 Identities = 184/261 (70%), Gaps = 8/261 (3%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTT--TGTCAGCGAGTCGCTGCCGGTGG 1456580 ||| | || || ||||||| || ||| | ||||| |||| | | | ||||| | Sbjct 520025 ATCGTTGTTGAAGCCGTCGGCATTGAGCAGGAGTTCCTGTCTG--ACGCTCTGCCCTGCG 520082 Query 1456581 CGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 | ||| | || ||||| |||| ||| ||||||||||||||||| || ||||||||||| Sbjct 520083 CCCTCCTTGGTATGAATGCCAA-GCTGATGTGCCAGTACATTGAGTTC-GTCGCCGACCG 520140 Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGA 1456700 ||| | | || |||||| | ||||| ||||| | | ||||| ||| | | Sbjct 520141 TCTGTTGGTCGCCCTCGGCAACA-AGAAGTACTACAATGCCACGAACCCCTTCGACTTCA 520199 Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACG 1456759 |||||| ||||| || | |||||||||||||| |||||| || | ||| || ||| Sbjct 520200 TGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACC 520259 Query 1456760 CCAAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 520260 AGAAGGCTGGTGTCATGGCCA 520280 >seq1 Length=1870422 Score = 98.7 bits (108), Expect = 1e-14 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 165748 TGGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACC 165807 |||| |||||| || | ||||||| ||||||| |||||||||||| |||| | |||| Sbjct 51322 TGGCCGACCTGATCTCCCTGGGCGCCATCGGTGCCCGCACCACCGAGTCCCAGCTACACC 51381 Query 165808 GCGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA 165864 ||||| |||| || | ||| | | ||||| |||| ||| ||| |||||||||||| Sbjct 51382 GCGAGCTGGCCTCCGGTCTGTCCTTCCCCATCGGCTACAAGAACGGCACCGACGGCA 51438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177772329909286