Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24] 403 sequences; 23,940,802 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 159 4e-34 seq9 129 7e-25 seq2 100 3e-16 >seq3 Length=1680607 Score = 159 bits (176), Expect = 4e-34 Identities = 318/465 (68%), Gaps = 6/465 (1%) Strand=Plus/Plus Query 104616 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 104675 |||| || ||||| |||||||| ||| || | |||||||| || | || ||||| | Sbjct 1459851 TCTACCTGGAGCCCTGGCACGCCGATGTCTTCGAGTTCCTGGATCTTCGCAAGAACCATG 1459910 Query 104676 GTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 104735 || | ||||| | || || ||||| |||| ||||||||||| || || | |||| Sbjct 1459911 GTAAGGAGGAAGTTCGAGCTCGTGATCTTTTCTACGCTCTCTGGACCCCCGACTTGTTCA 1459970 Query 104736 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTC 104795 ||||| | ||||||| | || | ||| |||| || ||||| || |||| || ||| Sbjct 1459971 TGAAGCGTGTTGAGGCCAACGGTGACTGGACTCTTTTCTGTCCCAACGAGGCTCCCGGTT 1460030 Query 104796 TCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTC 104855 | |||||| | || ||||||||||| || || || |||||| | ||||| | Sbjct 1460031 TGGCCGATGTCTACGGCGAGGAGTTTGAGGCTCTGTATGAGCGCTACGAGAAGGAAGGCC 1460090 Query 104856 GGGCGACTGC--GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAA 104912 | | | | || ||| | | || | || | | ||| | ||||||||| || |||| | Sbjct 1460091 GTG-GTC-GCAAGACCAT-CAAGGCTCAGAAGCTTTGGTACGCTATTCTCGAGGCTCAGA 1460147 Query 104913 CCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAA 104972 |||||||||||| || | ||||| ||||| || || || |||| ||||| || || | Sbjct 1460148 CCGAGACTGGTAACCCCTTTATGCTATACAAGGATGCTTGCAACCGCAAGAGCAACCAGA 1460207 Query 104973 AGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACA 105032 |||| | ||| ||| |||||||| || || || || ||| | || | | | Sbjct 1460208 AGAACCTTGGTACCATCCGCAGTTCCAACCTGTGCACTGAGATCATCGAGTACAGTGCTC 1460267 Query 105033 AAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCA 105077 |||||| ||||| || ||| | || || |||| || |||| Sbjct 1460268 CTGATGAGGTCGCTGTTTGCAACTTGGCTTCCCTCGCCCTGCCCA 1460312 >seq9 Length=753222 Score = 129 bits (142), Expect = 7e-25 Identities = 165/226 (73%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGT 94789 ||||||| || || ||||| || || ||||| || |||||| | ||| || | Sbjct 519747 CAGTTCCCTGCATCACCAAGAAGGCCGAATGGGCCATCAAGTGGATCACTGACCGCAACT 519806 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 || |||| ||| |||| || | || ||||| || |||||||||||||||||||| | Sbjct 519807 CGA---CCTTCGCTCAGCGTCTGGTTGCCTTTGCTTGCGTTGAGGGTATCTTCTTCTCCG 519863 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 | || || | |||| | ||||||||||||||| || || ||||| || || ||||| Sbjct 519864 GCTCTTTTGCCTCTATCTTTTGGCTCAAGAAGCGTGGCCTGATGCCCGGCCTGACCTTCT 519923 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | |||||||| ||||| ||||| ||||| | ||| || ||||| Sbjct 519924 CTAACGAGCTGATCTCGCGTGATGAGGGCATGCACACCGACTTTGC 519969 >seq2 Length=1807000 Score = 100 bits (110), Expect = 3e-16 Identities = 162/227 (71%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 9704 GCATCAATCTCATCAATGAAGACGATGCA-TGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762 ||||| || ||||||||||||| ||||| || || | || ||| ||| | | || || Sbjct 227204 GCATCGATTTCATCAATGAAGATAATGCAGGGGGTGCTCTT-GCGGGCGTTTGCGAATAG 227262 Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAA 9820 || || |||||| || || ||||| || |||||||| || || | | | || | | Sbjct 227263 GTCACGGACACGCGAGGGACCGACACCGACGAACATCTCGACGAATTCGGAACCGCTG-A 227321 Query 9821 CATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 9880 || | || |||||| || ||||||||| ||| |||| ||| || || |||||||| Sbjct 227322 CACT-GAAGAAGGGTACGCCAGATTCACCAGCAGTGGCCTTGGCAAGTAGCGTCTTACCA 227380 Query 9881 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 ||||| || ||| | ||| | ||||| || |||||||| || || Sbjct 227381 GTACCAGGGGGACCAGAGAGAATAGCACCACGGGGAATCTTCGCACC 227427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257861823720