Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24]
403 sequences; 23,940,802 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq3 159 4e-34
seq9 129 7e-25
seq2 100 3e-16
>seq3
Length=1680607
Score = 159 bits (176), Expect = 4e-34
Identities = 318/465 (68%), Gaps = 6/465 (1%)
Strand=Plus/Plus
Query 104616 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 104675
|||| || ||||| |||||||| ||| || | |||||||| || | || ||||| |
Sbjct 1459851 TCTACCTGGAGCCCTGGCACGCCGATGTCTTCGAGTTCCTGGATCTTCGCAAGAACCATG 1459910
Query 104676 GTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 104735
|| | ||||| | || || ||||| |||| ||||||||||| || || | ||||
Sbjct 1459911 GTAAGGAGGAAGTTCGAGCTCGTGATCTTTTCTACGCTCTCTGGACCCCCGACTTGTTCA 1459970
Query 104736 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTC 104795
||||| | ||||||| | || | ||| |||| || ||||| || |||| || |||
Sbjct 1459971 TGAAGCGTGTTGAGGCCAACGGTGACTGGACTCTTTTCTGTCCCAACGAGGCTCCCGGTT 1460030
Query 104796 TCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTC 104855
| |||||| | || ||||||||||| || || || |||||| | ||||| |
Sbjct 1460031 TGGCCGATGTCTACGGCGAGGAGTTTGAGGCTCTGTATGAGCGCTACGAGAAGGAAGGCC 1460090
Query 104856 GGGCGACTGC--GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAA 104912
| | | | || ||| | | || | || | | ||| | ||||||||| || |||| |
Sbjct 1460091 GTG-GTC-GCAAGACCAT-CAAGGCTCAGAAGCTTTGGTACGCTATTCTCGAGGCTCAGA 1460147
Query 104913 CCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAA 104972
|||||||||||| || | ||||| ||||| || || || |||| ||||| || || |
Sbjct 1460148 CCGAGACTGGTAACCCCTTTATGCTATACAAGGATGCTTGCAACCGCAAGAGCAACCAGA 1460207
Query 104973 AGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACA 105032
|||| | ||| ||| |||||||| || || || || ||| | || | | |
Sbjct 1460208 AGAACCTTGGTACCATCCGCAGTTCCAACCTGTGCACTGAGATCATCGAGTACAGTGCTC 1460267
Query 105033 AAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCA 105077
|||||| ||||| || ||| | || || |||| || ||||
Sbjct 1460268 CTGATGAGGTCGCTGTTTGCAACTTGGCTTCCCTCGCCCTGCCCA 1460312
>seq9
Length=753222
Score = 129 bits (142), Expect = 7e-25
Identities = 165/226 (73%), Gaps = 6/226 (3%)
Strand=Plus/Plus
Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGT 94789
||||||| || || ||||| || || ||||| || |||||| | ||| || |
Sbjct 519747 CAGTTCCCTGCATCACCAAGAAGGCCGAATGGGCCATCAAGTGGATCACTGACCGCAACT 519806
Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
|| |||| ||| |||| || | || ||||| || |||||||||||||||||||| |
Sbjct 519807 CGA---CCTTCGCTCAGCGTCTGGTTGCCTTTGCTTGCGTTGAGGGTATCTTCTTCTCCG 519863
Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909
| || || | |||| | ||||||||||||||| || || ||||| || || |||||
Sbjct 519864 GCTCTTTTGCCTCTATCTTTTGGCTCAAGAAGCGTGGCCTGATGCCCGGCCTGACCTTCT 519923
Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
| |||||||| ||||| ||||| ||||| | ||| || |||||
Sbjct 519924 CTAACGAGCTGATCTCGCGTGATGAGGGCATGCACACCGACTTTGC 519969
>seq2
Length=1807000
Score = 100 bits (110), Expect = 3e-16
Identities = 162/227 (71%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 9704 GCATCAATCTCATCAATGAAGACGATGCA-TGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762
||||| || ||||||||||||| ||||| || || | || ||| ||| | | || ||
Sbjct 227204 GCATCGATTTCATCAATGAAGATAATGCAGGGGGTGCTCTT-GCGGGCGTTTGCGAATAG 227262
Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAA 9820
|| || |||||| || || ||||| || |||||||| || || | | | || | |
Sbjct 227263 GTCACGGACACGCGAGGGACCGACACCGACGAACATCTCGACGAATTCGGAACCGCTG-A 227321
Query 9821 CATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 9880
|| | || |||||| || ||||||||| ||| |||| ||| || || ||||||||
Sbjct 227322 CACT-GAAGAAGGGTACGCCAGATTCACCAGCAGTGGCCTTGGCAAGTAGCGTCTTACCA 227380
Query 9881 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
||||| || ||| | ||| | ||||| || |||||||| || ||
Sbjct 227381 GTACCAGGGGGACCAGAGAGAATAGCACCACGGGGAATCTTCGCACC 227427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583257861823720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |