Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24]
403 sequences; 23,940,802 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq16 194 2e-44
seq9 118 1e-21
seq8 118 1e-21
seq20 111 2e-19
seq2 98.7 1e-15
seq3 87.8 2e-12
>seq16
Length=566148
Score = 194 bits (214), Expect = 2e-44
Identities = 179/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||||||||| || || ||||| || |||||
Sbjct 153818 ATGCAGATCTTCGTTAAGACACTCACCGGCAAGACAATCACGCTTGAAGTCGAGTCCTCC 153877
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || ||||| ||| || || ||||| ||||||||||| || ||||||
Sbjct 153878 GATACCATCGACAACGTGAAGAGTAAGATCCAAGACAAAGAGGGAATTCCCCCGGACCAG 153937
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| |||||||| || ||||||||||| || | ||||| ||| ||||||| ||
Sbjct 153938 CAGCGTCTTATTTTTGCCGGCAAGCAACTCGAAGACGGCCGTACTCTATCAGACTACAAC 153997
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| || ||||| || ||| | |||||||| |||||
Sbjct 153998 ATCCAGAAGGAATCTACCCTTCACCTTGTCCTCCGTCTTCGTGGTGG 154044
Score = 172 bits (190), Expect = 6e-38
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || || |||||||| || |||||||||||||| || |
Sbjct 154046 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACGATCACTCTTGAGGTTGAATCTAGC 154105
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| || ||||| ||||||||||| || ||||| ||||||
Sbjct 154106 GACACCATCGACAACGTCAAGAGCAAGATTCAAGACAAGGAGGGCATCCCTCCTGACCAG 154165
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||| ||||| || ||||| | ||| || || | || || ||
Sbjct 154166 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGACGGTCGCACTCTGTCCGATTACAAC 154225
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| ||||||||||| || || | ||||| || || || ||
Sbjct 154226 ATCCAGAAGGAGTCCACTCTTCACCTGGTGCTCCGTCTGCGTGGCGGCCA 154275
Score = 161 bits (178), Expect = 1e-34
Identities = 166/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 27416 TTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTG 27475
|||||||||| || || ||||| || || || |||||||| ||||| |||| | || |
Sbjct 153600 TTGTCAAGACCCTGACTGGCAAAACCATCACCCTTGAGGTCGAGTCCAGTGACACTATCG 153659
Query 27476 CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA 27535
||| | ||| | || || |||||||||||||| || || || |||||||||||||| |
Sbjct 153660 ATAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGTCTGA 153719
Query 27536 TTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595
| || || || |||||||| || || | ||||| ||| | ||||| || |||| ||||
Sbjct 153720 TCTTCGCCGGCAAGCAACTTGAAGACGGCCGTACTCTATCCGACTACAACATCCAGAAGG 153779
Query 27596 AATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||| ||||| || || | || ||||| |||||
Sbjct 153780 AATCCACCCTTCACCTTGTTCTCCGCCTTCGTGGTGG 153816
Score = 145 bits (160), Expect = 9e-30
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| || |||||||| || || ||||| ||||| | || | ||| | ||| | ||| |
Sbjct 153333 ACAGGAAAGACTATCACCCTCGAGGTGGAGTCCAGCGACACCATCGACAATGTCAAGTCG 153392
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| |||||||||||||||||||||||||| |||||||||||||| || || || || |||
Sbjct 153393 AAGATTCAGGACAAGGAGGGAATTCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGCAAG 153452
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
||||| || || | ||||| ||| | ||||| || | ||||| || || || || ||
Sbjct 153453 CAACTTGAAGACGGCCGTACTCTATCCGACTACAACATTCAAAAAGAGTCAACCCTGCAC 153512
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| |||| | || |||||
Sbjct 153513 CTCGTCCTGCGCTTGCGTGGTGG 153535
>seq9
Length=753222
Score = 118 bits (130), Expect = 1e-21
Identities = 152/209 (73%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 64660 ACTAAAAAGGCTGAATGGGCCATCCGGTGGATGAAT---CGTGGGTCGTCGTTTGGTCAG 64716
|| || ||||| |||||||||||| |||||| | | || ||| | || | ||||
Sbjct 519761 ACCAAGAAGGCCGAATGGGCCATCAAGTGGATCACTGACCGCAACTCGACCTTCGCTCAG 519820
Query 64717 CGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATT 64776
||||| | || ||||| || || || || || ||||| || || || || |||||
Sbjct 519821 CGTCTGGTTGCCTTTGCTTGCGTTGAGGGTATCTTCTTCTCCGGCTCTTTTGCCTCTATC 519880
Query 64777 TTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCT 64836
|| ||||| || ||||| ||||||||||| || ||| | || || ||||||||||||||
Sbjct 519881 TTTTGGCTCAAGAAGCGTGGCCTGATGCCCGGCCTGACCTTCTCTAACGAGCTGATCTCG 519940
Query 64837 CGGGACGAGGGGCTCCACCAAGAATTTGC 64865
|| || ||||| | ||| || |||||
Sbjct 519941 CGTGATGAGGGCATGCACACCGACTTTGC 519969
>seq8
Length=772335
Score = 118 bits (130), Expect = 1e-21
Identities = 137/182 (75%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||| ||||| || || || ||||| | || | |||
Sbjct 595845 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 595786
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| | || || |||||||||||||| ||||| || || |||||||||||
Sbjct 595785 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAGCGTCTT 595726
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593
|| || || || ||||| |||||||||| || || || ||| ||||| || |||| ||
Sbjct 595725 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGC-GACTACAACATCCAGAA 595667
Query 27594 GG 27595
||
Sbjct 595666 GG 595665
>seq20
Length=419765
Score = 111 bits (122), Expect = 2e-19
Identities = 283/428 (66%), Gaps = 2/428 (0%)
Strand=Plus/Plus
Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043
|| || ||||| ||| ||||||||||| | ||| | ||| || |||||| |
Sbjct 120704 GATGGTCTCAAACCTGGTCAGCGCAAGGTCTTGTACACTTGCTTCCGCCGTAACCTGAAG 120763
Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103
| || |||||||| | | ||| | || ||| | | || ||||| || |||
Sbjct 120764 AAAGATATGAAGGTCGTTGAACTGGCTGGTCTCGTTTCCGGAATGACAGCCTACCAGCAC 120823
Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163
||||| | ||||||||| || || || || ||||||| || |||||| | ||
Sbjct 120824 GGCGATACCTCGCTCCAGCAAACGATCGTTGGTCTGGCTCAGACTTTCGTCGGTTCCAAC 120883
Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223
||||| |||| ||||| || ||| | ||||| | || ||| ||||| |||
Sbjct 120884 AACCTCAACTGTCTCGAACCTAGTGGTAACTTTGGTAGTCGACTCCAGGGTGGTGGCGAT 120943
Query 32224 GCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGC-ACCTTCGACGCGCAAGATTTTCGA 32282
||| || | |||||||| | ||| || || | |||||| | |||| | ||| |
Sbjct 120944 TGTGCTAGTGCTCGTTACATTTACACTCGCCTGTCTCCCTTCG-CACGCAGAGTATTCCA 121002
Query 32283 CCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGT 32342
||| |||| || || |||| | ||||||| | || || ||| || | || || |
Sbjct 121003 CCCCGCGGATGAGCCGTTGCTGACGTACAATGTGGACGATGGTGAGAAAATTGAACCTGA 121062
Query 32343 GTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402
| ||||| || || |||| |||||| || | |||||||| || || || ||||| ||
Sbjct 121063 GACCTACATGCCCGTCGTTCCTATGATCCTGATCAACGGTGCTGATGGTATTGGAACCGG 121122
Query 32403 GTTCAGTT 32410
| ||||
Sbjct 121123 ATGGAGTT 121130
>seq2
Length=1807000
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| || || || ||||||||||| || || || ||||||||||| || |||
Sbjct 42355 GACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAG 42296
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || || || | ||||| || |||| ||||| || || ||||| || || |
Sbjct 42295 GATGGCCGCACTCTGTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 42236
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 42235 CGCCTGCGTGGTGG 42222
>seq3
Length=1680607
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| ||||| ||||||||||| ||||| |||||| | |||||||| | ||||| ||
Sbjct 1461180 GTACGCAGGTAGTACATGCCGGTCTTCAGGCCCATTTTCCAGCCAGCAAAATGCATCGAG 1461121
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157
||| ||| | | ||||| | || |||| ||||| || ||||| ||||| ||||
Sbjct 1461120 GTGATCTTGCCCATGGTGGGCTCCTTCATGTGAATGTTAAGGGACTGCGACTGGTCGATG 1461061
Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180
|| || ||||| || || |||||
Sbjct 1461060 AAGGCACCACGGTCGGCGGCCAT 1461038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570307527061360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |