Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24]
403 sequences; 23,940,802 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq16 91.5 1e-13
>seq16
Length=566148
Score = 91.5 bits (100), Expect = 1e-13
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
||||||||| || || || |||| || || || |||| ||||| || ||||| || ||
Sbjct 153500 CTCTTTTTGAATGTTGTAGTCGGATAGAGTACGGCCGTCTTCAAGTTGCTTGCCGGCGAA 153441
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
|| |||||||||||||||| || | | ||| |||||| || ||| |||| |
Sbjct 153440 GATCAGACGCTGCTGGTCGGGAGGAATTCCCTCCTTGTCCTGAATCTTCGACTTGACATT 153381
Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCA 39262
| | || ||||| |||||||| || | |||||| | ||||| ||||
Sbjct 153380 GTCGATGGTGTCGCTGGACTCCACCTCGAGGGTGATAGTCTTTCCTGTCA 153331
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||| || || ||| ||| || || || || ||||||| || || || |||| ||
Sbjct 154255 CACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGACCGTCCTC 154196
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| ||||| ||||| || |||||||||||||| | || | || ||| |||||
Sbjct 154195 CAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTG 154136
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|| || |||| ||| | | | || ||||| || || || || | ||||| | |
Sbjct 154135 AATCTTGCTCTTGA-CGTTGTCGATGGTGTCGCTAGATTCAACCTCAAGAGTGATCGTCT 154077
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || ||||| || || || ||||| |||||
Sbjct 154076 TGCCAGTCAGGGTCTTGACGAAGATCTGCAT 154046
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153
|| || || || || || || | || || || |||| || || || ||||| |||||
Sbjct 154008 TCCTTCTGGATGTTGTAGTCTGATAGAGTACGGCCGTCTTCGAGTTGCTTGCCGGCAAAA 153949
Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213
||||||||||||||||| | ||| | | ||||||||| ||| || || | |||
Sbjct 153948 ATAAGACGCTGCTGGTCCGGGGGAATTCCCTCTTTGTCTTGGATCTTACTCTTCA-CGTT 153890
Query 39214 G-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272
| | | |||||| ||||| || || | |||||| | || || || || || |||||
Sbjct 153889 GTCGATGGTATCGGAGGACTCGACTTCAAGCGTGATTGTCTTGCCGGTGAGTGTCTTAAC 153830
Query 39273 AAAGATTTGCAT 39284
||||| |||||
Sbjct 153829 GAAGATCTGCAT 153818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429543490259939
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |