Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24]
403 sequences; 23,940,802 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq16 113 3e-20
>seq16
Length=566148
Score = 113 bits (124), Expect = 3e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || ||||||||||| || ||||| || |
Sbjct 154046 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACGATCACTCTTGAGGTTGAATCTAGC 154105
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || ||| ||||| || || | || || || ||
Sbjct 154106 GACACCATCGACAACGTCAAGAGCAAGATTCAAGACAAGGAGGGCATCCCTCCTGACCAG 154165
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || ||||| ||||| || ||||| |||| |||||| | ||||||||||
Sbjct 154166 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGACGGTCGCACTCTGTCCGATTACAAC 154225
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 154226 ATCCAGAAGGAGTCCAC 154242
Score = 98.7 bits (108), Expect = 7e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| |||||||| || ||||| || || || ||||| || ||||| || ||| |
Sbjct 153818 ATGCAGATCTTCGTTAAGACACTCACCGGCAAGACAATCACGCTTGAAGTCGAGTCCTCC 153877
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | || | | || || || |||||||| || | || || || ||
Sbjct 153878 GATACCATCGACAACGTGAAGAGTAAGATCCAAGACAAAGAGGGAATTCCCCCGGACCAG 153937
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || ||||||||||| ||||| ||||||| || ||| || || ||||||
Sbjct 153938 CAGCGTCTTATTTTTGCCGGCAAGCAACTCGAAGACGGCCGTACTCTATCAGACTACAAC 153997
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || || || ||
Sbjct 153998 ATCCAGAAGGAATCTAC 154014
Score = 95.1 bits (104), Expect = 8e-15
Identities = 127/174 (73%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 23635 ACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACA 23693
|| ||||| || ||||| ||||| || || |||| ||||| | || ||| | || |
Sbjct 153333 ACAGGAAAGACTATCACCCTCGAGGTGGAGTCCAGCGACACCATCGACAATGTCAAGTCG 153392
Query 23694 AAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAA 23753
|| | || ||||| || || | || || || || |||||| | || || ||||||||
Sbjct 153393 AAGA-TTCAGGACAAGGAGGGAATTCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGCAA 153451
Query 23754 ACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCAC 23807
||||| ||||||| || ||| || ||| |||||||| ||||||||||| ||
Sbjct 153452 GCAACTTGAAGACGGCCGTACTCTATCCGACTACAACATTCAAAAAGAGTCAAC 153505
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338007939844724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |