Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20decumbens_20[genbank_20GCA_5F002072245.1_202017-03-24] 403 sequences; 23,940,802 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq16 158 3e-33 seq8 127 5e-24 seq3 114 3e-20 >seq16 Length=566148 Score = 158 bits (174), Expect = 3e-33 Identities = 146/185 (79%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 |||||||| || ||||||||||||||||| | ||||||||||| || ||||| Sbjct 153333 ACAGGAAAGACTATCACCCTCGAGGTGGAGTCCAGCGACACCATCGACAATGTCAAGTCG 153392 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||||||||| || ||||| ||||| |||||||| || || ||||||||||| || Sbjct 153393 AAGATTCAGGACAAGGAGGGAATTCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGCAAG 153452 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 || || ||||| || | ||||| |||| || ||| | |||||||| ||||| ||||| Sbjct 153453 CAACTTGAAGACGGCCGTACTCTATCCGACTACAACATTCAAAAAGAGTCAACCCTGCAC 153512 Query 178125 CTTGT 178129 || || Sbjct 153513 CTCGT 153517 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| || || || || ||| || Sbjct 153821 CAGATCTTCGTTAAGACACTCACCGGCAAGACAATCACGCTTGAAGTCGAGTCCTCCGAT 153880 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| || |||||||| ||||| || ||||||||||| Sbjct 153881 ACCATCGACAACGTGAAGAGTAAGATCCAAGACAAAGAGGGAATTCCCCCGGACCAGCAG 153940 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || ||||| || || |||||||| || | ||||| | || || ||| || Sbjct 153941 CGTCTTATTTTTGCCGGCAAGCAACTCGAAGACGGCCGTACTCTATCAGACTACAACATC 154000 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || ||||| Sbjct 154001 CAGAAGGAATCTACCCTTCACCTTGT 154026 Score = 134 bits (148), Expect = 3e-26 Identities = 156/209 (75%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || ||||| || || || || || || |||||||| || ||||| ||| ||| Sbjct 154049 CAGATCTTCGTCAAGACCCTGACTGGCAAGACGATCACTCTTGAGGTTGAATCTAGC--- 154105 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||| |||||||| |||||||| ||||| || || |||||||| |||||| Sbjct 154106 GACACCATCGACAACGTCAAGAGCAAGATTCAAGACAAGGAGGGCATCCCTCCTGACCAG 154165 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| || || || ||||| || || || | ||||| ||||||| ||| Sbjct 154166 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGACGGTCGCACTCTGTCCGATTACAAC 154225 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || || || || Sbjct 154226 ATCCAGAAGGAGTCCACTCTTCACCTGGT 154254 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAG 177992 || || || || || || ||||| |||||||| ||||| || | ||||| ||||| Sbjct 153602 GTCAAGACCCTGACTGGCAAAACCATCACCCTTGAGGTCGAGTCCAGTGACACTATCGAT 153661 Query 177993 AACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATC 178052 || ||||| ||||| |||||||| || || ||||| || |||||||| || || ||| Sbjct 153662 AATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGTCTGATC 153721 Query 178053 TTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAA 178112 |||||||| || || || ||||| || | ||||| |||| || ||| |||| || ||| Sbjct 153722 TTCGCCGGCAAGCAACTTGAAGACGGCCGTACTCTATCCGACTACAACATCCAGAAGGAA 153781 Query 178113 TCAACACTGCATCTTGTT 178130 || || || || |||||| Sbjct 153782 TCCACCCTTCACCTTGTT 153799 >seq8 Length=772335 Score = 127 bits (140), Expect = 5e-24 Identities = 144/192 (75%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 177920 GCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AG 177976 |||| | | |||||| || || || || || || || || |||||||| || || || Sbjct 595855 GCTCAACAGTTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAG 595796 Query 177977 CTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGA 178036 | ||||||||||| |||||||| ||||| |||||||| || || || || ||||| Sbjct 595795 C---GACACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCGGA 595739 Query 178037 CCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 ||||| || |||||||||||||| || |||||||| ||||| | ||||| ||| || Sbjct 595738 TCAGCAGCGTCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTA 595679 Query 178097 TAACGTCCAAAA 178108 ||| |||| || Sbjct 595678 CAACATCCAGAA 595667 >seq3 Length=1680607 Score = 114 bits (126), Expect = 3e-20 Identities = 198/284 (70%), Gaps = 8/284 (3%) Strand=Plus/Minus Query 214123 CCAAAGTTTTTCTGGTTGCTTTTGCGG---CAAATGGCATCTTTGTATGCGATGAAAGGC 214179 |||| ||| ||||||||||| |||||| ||| ||||| |||||| || ||||| Sbjct 1460217 CCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTATAGCAT-AAAGGG 1460162 Query 214180 ATTCCCAC-CTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGAC 214238 || ||| |||| ||||| | ||||| | ||| || | || ||||| | | Sbjct 1460161 GTTACCAGTCTCGGTCTGAGCCTCGAGAATAGCGTACCAAAGCTTCTGAGCCTTGATGGT 1460102 Query 214239 CTTTTTGGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTA 214298 ||| | | || || || ||||| ||||| |||| |||||| ||| ||||| Sbjct 1460101 CTTGCGACCACGGCCTTCCTTCTCGTAGCGCTCATACAGAGCCTCAAACTCCTCGCCGTA 1460042 Query 214299 GACATCATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCT 214358 |||||| | | |||||||||||||||||| ||||||||| |||| | || || || Sbjct 1460041 GACATCGGCCAAACCGGGAGCCTCGTTGGGACAGAAAAGAGTCCAGTCACCGTTGGCCTC 1459982 Query 214359 GACTCTTTTCATGAAAAGGTCGGAAGTCCAGATTGCATAAAAAA 214402 || | |||||||| | ||||| ||||||| || || |||| Sbjct 1459981 AACACGCTTCATGAACAAGTCGGGGGTCCAGAGAGCGTAGAAAA 1459938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203724984609182