Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq940 91.5 2e-13
>seq940
Length=59259
Score = 91.5 bits (100), Expect = 2e-13
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
||||| || |||||||| ||| ||| | |||||||| ||||||||||| |||||
Sbjct 49594 ATATAAGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 49535
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| ||||| || | || || || || | ||| || || | ||
Sbjct 49534 AAGCCGTAGAAGCAACGGGCCTCGGGAATCTGGACCTCTCCACTGAAACGCTCGACAAGG 49475
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCA 17393
|| ||||| || || |||||| |||||||| || ||||
Sbjct 49474 TTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCA 49435
Score = 82.4 bits (90), Expect = 8e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014
|||| |||||| ||||| || || | |||||||| | ||| || ||||| ||
Sbjct 49928 AACAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 49869
Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074
|| |||| || |||||| || || ||||| | ||| || || | |||||| || |||
Sbjct 49868 AAAGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCA 49809
Query 17075 GAAAAGAATATACCCTCGAC 17094
|| ||||| |||||||||||
Sbjct 49808 GAGAAGAAGATACCCTCGAC 49789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517537636267080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |