Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq940 91.5 2e-13 >seq940 Length=59259 Score = 91.5 bits (100), Expect = 2e-13 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || |||||||| ||| ||| | |||||||| ||||||||||| ||||| Sbjct 49594 ATATAAGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 49535 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| ||||| || | || || || || | ||| || || | || Sbjct 49534 AAGCCGTAGAAGCAACGGGCCTCGGGAATCTGGACCTCTCCACTGAAACGCTCGACAAGG 49475 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCA 17393 || ||||| || || |||||| |||||||| || |||| Sbjct 49474 TTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCA 49435 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| |||||| ||||| || || | |||||||| | ||| || ||||| || Sbjct 49928 AACAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 49869 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || |||| || |||||| || || ||||| | ||| || || | |||||| || ||| Sbjct 49868 AAAGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCA 49809 Query 17075 GAAAAGAATATACCCTCGAC 17094 || ||||| ||||||||||| Sbjct 49808 GAGAAGAAGATACCCTCGAC 49789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517537636267080