Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq940 206 3e-48 seq107 127 2e-24 seq1129 118 1e-21 seq930 95.1 1e-14 >seq940 Length=59259 Score = 206 bits (228), Expect = 3e-48 Identities = 322/455 (71%), Gaps = 4/455 (1%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||| | ||||| || ||||||||| || | | ||| | | |||| ||| | Sbjct 49712 AGAAGGCCAACTGGGCCCTCCGCTGGATCAACGACCGCGAGTCAACTTTCGCTTCGCGTC 49771 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| |||||||| || |||||||| ||||||| || ||| |||||| |||| || | Sbjct 49772 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCT 49831 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| || ||||| ||||| |||||||||||| ||||||||| ||||| | | Sbjct 49832 GGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGTG 49891 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCG-ACCG 117220 |||||||||| || ||||| |||||| |||||||| || || || || ||| Sbjct 49892 ACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 49951 Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 | | | | ||| ||| ||| | || || |||| ||| |||||| ||||| Sbjct 49952 ATCCTAAGGTGGTTCA-GGACATCATTGTTGAGGCCGTCGGCATTGAGCAGGAGTTCCTT 50010 Query 117281 ACCGAAGCGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACAT 117339 || || || || || ||| ||||||| || | || | | | |||| | ||||| Sbjct 50011 ACTGACGCTCTTCC-CTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGTGCGAGTACAT 50069 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 |||||||||||| ||| | |||||| | | || | | | ||| |||||||| | | Sbjct 50070 CGAGTTCGTCGCTGACCGCCTGCTGGTGGCTCTCGGCAACAAGAAGTACTACAACGCTAC 50129 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 |||||| | ||||| ||| | ||||||| ||| Sbjct 50130 CAACCCCTTCGACTTCATGGAGTCCATCTCCCTGG 50164 Score = 205 bits (226), Expect = 1e-47 Identities = 216/284 (76%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | || || Sbjct 49308 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATCTC 49367 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| ||||||| | ||| |||||||| | ||||| | ||||| Sbjct 49368 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTCATTTCC 49427 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| |||||||| ||||||||| |||||| || ||||||||||| || ||||||||| Sbjct 49428 CACGTCCTGGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGTCGAGCGT 49487 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | ||||| ||| | ||||||| || |||||||||||||| |||||| ||| Sbjct 49488 TTCAGTGGAGAGGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATG 49547 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 |||||| | ||||| || | || || ||||||||||| || Sbjct 49548 GAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACTTA 49591 >seq107 Length=23034 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | || || || |||||||| |||| ||||| | | Sbjct 1880 ATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACACTCGAGGTCGAGAGCTCA 1939 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || || | ||||| |||||||| ||| | ||||| Sbjct 1940 GATACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 1998 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || |||||||| |||| || || ||| ||||| || Sbjct 1999 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAA 2058 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| |||| || || || |||||||| || | |||||| Sbjct 2059 TATCCAGAAGGAGTCCACTCTCCACCTGGTGTTGCGTCTGCGTGGCGGC 2107 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGT-GCAAACGCTCAAG 40770 |||| ||||||||||||||| | || || || ||| ||| | | | |||| ||||| Sbjct 1162 TCACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACG-TCAAG 1220 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | ||||| ||||| || || | |||||||| || || |||| ||| ||| Sbjct 1221 TCCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGC 1280 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || || | |||||||| || || |||||||| |||||| |||| || Sbjct 1281 AAGCAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTC 1340 Query 40891 CATCTAGTGTTGCGCTTGAGGGGCGG 40916 || || || | ||| | | ||||| Sbjct 1341 CACCTGGTCCTTCGCCTCCGTGGCGG 1366 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || || || || |||||| |||| ||||| | | || | | | Sbjct 1434 TCGTTAAGACCCTAACTGGAAAGACTATCACCCTCGAGGTCGAGAGCTCAGATACCATTG 1493 Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | |||| ||||| || || | ||||| |||||||| ||| | ||||||||||| || Sbjct 1494 ACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTT 1552 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || || | || ||||| || ||||| || ||||| Sbjct 1553 ATCTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCCTTTCTGATTACAATATTCAGAAA 1612 Query 40879 GAGGCCACGCTGCATCTAGT 40898 ||| |||| || || || || Sbjct 1613 GAGTCCACACTTCACCTTGT 1632 >seq1129 Length=20362 Score = 118 bits (130), Expect = 1e-21 Identities = 137/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| |||| ||||| | | ||||| | | Sbjct 2342 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 2283 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | || || |||||||| ||| | |||||||| || || Sbjct 2282 GACAACG-TCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCGCCT 2224 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | |||||||| | |||||||||||||||||| Sbjct 2223 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 2164 Query 40878 GG 40879 || Sbjct 2163 GG 2162 >seq930 Length=45409 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| | |||||||| || || |||| ||| ||||| ||||| || Sbjct 25069 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 25128 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | ||||| ||| || |||||||||||||||||| | || || || || || | Sbjct 25129 GATGGCCGCACTCTCTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 25188 Query 40903 CGCTTGAGGGGCGGCGG 40919 ||| || | || || || Sbjct 25189 CGCCTGCGTGGTGGTGG 25205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515211272064560