Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq107 125 8e-24 seq1129 96.9 4e-15 >seq107 Length=23034 Score = 125 bits (138), Expect = 8e-24 Identities = 162/220 (74%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||||| || | ||| |||||| || ||||| || || | ||||| || | Sbjct 2095 ACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCC 2036 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || ||||||||||||||||| || || ||||||||||||| || | || |||||| Sbjct 2035 GTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTT 1976 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| || |||| ||| | | | || || |||| || || |||| | Sbjct 1975 GTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCTGAGCTC---TCGACCTCGAGTG 1920 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| || || || | ||||| |||||||||||||| Sbjct 1919 TGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 1880 Score = 120 bits (132), Expect = 3e-22 Identities = 150/202 (74%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 42986 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 43045 |||| |||||| |||||||| || || | ||||| || |||| || ||||||||||| Sbjct 1849 TGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACC 1790 Query 43046 AGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 |||||| || || ||||||||||||| || | || |||||||||| ||| || || Sbjct 1789 AGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 1730 Query 43106 GAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTA 43161 || ||| | | | || || |||| || || |||| |||||||| || || || | Sbjct 1729 GA-CGTTGTCAATGGTATCTGAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCTGTCA 1674 Query 43162 GCGTCTTTACAAAGATTTGCAT 43183 ||||| |||||||||||||| Sbjct 1673 AAGTCTTGACAAAGATTTGCAT 1652 Score = 93.3 bits (102), Expect = 5e-14 Identities = 137/190 (72%), Gaps = 8/190 (4%) Strand=Plus/Minus Query 42986 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 43045 |||| ||| || |||||||||||||||| || || || | || || |||||||| || Sbjct 1621 TGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCTTCAAGCTGCTTGCC 1562 Query 43046 AGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 |||||| || || || |||||||||| || | || |||||||||| ||| || || Sbjct 1561 AGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 1502 Query 43106 GAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTA 43161 || ||| | | | || || |||| || || |||| ||||| || || || |||| Sbjct 1501 GA-CGTTGTCAATGGTATCTGAGCTC---TCGACCTCGAGGGTGATAGTCTTTCCAGTTA 1446 Query 43162 GCGTCTTTAC 43171 | ||||| || Sbjct 1445 GGGTCTTAAC 1436 Score = 91.5 bits (100), Expect = 2e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || || ||||| | || || || | || || |||||||| |||||||| Sbjct 1331 CTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 1272 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | | |||||||||| ||| || |||| ||| Sbjct 1271 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1213 Query 43112 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | || ||||| || || || || | |||||||||||||| || Sbjct 1212 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 1164 >seq1129 Length=20362 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 2162 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 2221 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | || |||||| ||| ||| || |||| ||| | Sbjct 2222 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 2280 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || ||||||| || ||||| || ||||| || ||||| || Sbjct 2281 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2340 Query 43173 AA 43174 || Sbjct 2341 AA 2342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571808801156680