Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq107 113 3e-20
>seq107
Length=23034
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| ||||| | || ||||||||| | ||| || ||||| || || ||||| ||
Sbjct 2106 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAG 2047
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| |||| |||||| || ||||| || || |||||||||||| |||
Sbjct 2046 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGA 1987
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | | || | ||| | |||||
Sbjct 1986 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACC 1927
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| || || || | ||| || |||||||| |||||
Sbjct 1926 TCGAGTGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 1880
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| || || ||||| || || ||| |||| |||| |||||| || |||||
Sbjct 1842 TCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAG 1783
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || |||||||||||| ||| | || ||||||||| ||||| ||| | | |
Sbjct 1782 ATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 1723
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||| | ||||| || | |||||||| || || || | ||| || |||
Sbjct 1722 TCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACA 1663
Query 34379 AAGATCTGCAT 34389
||||| |||||
Sbjct 1662 AAGATTTGCAT 1652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323067153011360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |