Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq1170 107 4e-18
seq1016 87.8 4e-12
>seq1170
Length=128135
Score = 107 bits (118), Expect = 4e-18
Identities = 133/180 (74%), Gaps = 4/180 (2%)
Strand=Plus/Plus
Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261
||||| || |||||| || | ||||| |||||||| |||| |||||| ||||| |||
Sbjct 19128 TGTCCACCATTCAAGATCATCATCCTCGACGAGGCCGACAGCATGACACAAGACGCCCAG 19187
Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTG--TGACGCGTTTTTGCCTGGTGT 254319
||||| || ||||| |||||||||| || | || | | ||||| || || || || |
Sbjct 19188 TCCGCTCTGCGCCGCACGATGGAGA--CATACAGTAGGATCACGCGGTTCTGTCTTGTTT 19245
Query 254320 GCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
||||||| || || ||||| | || || ||| ||| ||| |||||| |||||||
Sbjct 19246 GCAACTATGTCACGCGCATCATTGAGCCTCTTGCTAGTCGTTGCAGCAAGTTCCGATTCA 19305
>seq1016
Length=40071
Score = 87.8 bits (96), Expect = 4e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336
|| ||||| || |||| ||||||||||||| | || |||||||| || || |||
Sbjct 22619 TTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTTCCTTGATCTGCGGAAG 22678
Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396
||| |||| || ||| | | || |||||||||||||||| ||||| ||||
Sbjct 22679 AACCACGGTAAGGAGGAGGTTCGTGCCCGTGACCTCTTCTACGCTTTGTGGACTCCCGAT 22738
Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCC 249456
| |||||| ||||| ||||| |||| || ||||| || | | ||| ||| |||
Sbjct 22739 CTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGGACACTCTTCTGTCCCAACGAGGCC 22798
Query 249457 CCGGACCTCATCGATCTACACGGCGCCGACTTCGAC 249492
|| | ||| ||| | |||| | || ||||||
Sbjct 22799 CCCGGCCTGGCTGATGTCTACGGTGATGAGTTCGAC 22834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073749464355008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |