Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq107 113 1e-19 >seq107 Length=23034 Score = 113 bits (124), Expect = 1e-19 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || || || | ||| || || ||||||||||||||||| Sbjct 1881 ATACCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCC 1822 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | ||||| || || || || ||||| || || || | ||| || || || Sbjct 1821 GAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGG 1762 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || || ||||| ||||| | || || || || | |||||| || | || Sbjct 1761 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATC-TGAGCTCTC 1703 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||| || ||||| || || | || || ||||| || ||||| Sbjct 1702 GACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 1652 Score = 107 bits (118), Expect = 4e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| ||||||||||| || ||||| | ||||| || || || || ||| Sbjct 2076 GTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCA 2017 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || || || || || || || ||||| ||||| | || Sbjct 2016 GCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 1957 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | |||||| || | || ||||| ||||| || ||||| ||||| | || Sbjct 1956 ACGTTGTCAATGGTATC-TGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCAGTCAAAGT 1898 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 1897 CTTGACAAAGATTTGCAT 1880 Score = 104 bits (114), Expect = 5e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || || || | ||| || |||||||||||||| || ||| Sbjct 1653 ATACCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCA 1594 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||| ||||| || || || ||||| || || || | || || || || Sbjct 1593 GAAAGGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGG 1534 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || || ||||| ||||| | || || || || | |||||| || | || Sbjct 1533 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATC-TGAGCTCTC 1475 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 ||||| || || |||||||| ||||| || || || || Sbjct 1474 GACCTCGAGGGTGATAGTCTTTCCAGTTAGGGTCTTAAC 1436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151380239928548