Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq107 113 1e-19
>seq107
Length=23034
Score = 113 bits (124), Expect = 1e-19
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | || || || || | ||| || || |||||||||||||||||
Sbjct 1881 ATACCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCC 1822
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||| | ||||| || || || || ||||| || || || | ||| || || ||
Sbjct 1821 GAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGG 1762
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || || ||||| ||||| | || || || || | |||||| || | ||
Sbjct 1761 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATC-TGAGCTCTC 1703
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| ||||| || ||||| || || | || || ||||| || |||||
Sbjct 1702 GACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 1652
Score = 107 bits (118), Expect = 4e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| ||||||||||| || ||||| | ||||| || || || || |||
Sbjct 2076 GTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCA 2017
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || || || || || || || || ||||| ||||| | ||
Sbjct 2016 GCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 1957
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | |||||| || | || ||||| ||||| || ||||| ||||| | ||
Sbjct 1956 ACGTTGTCAATGGTATC-TGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCAGTCAAAGT 1898
Query 104542 TTTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 1897 CTTGACAAAGATTTGCAT 1880
Score = 104 bits (114), Expect = 5e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | || || || || | ||| || |||||||||||||| || |||
Sbjct 1653 ATACCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCA 1594
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | ||| ||||| || || || ||||| || || || | || || || ||
Sbjct 1593 GAAAGGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGG 1534
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || || ||||| ||||| | || || || || | |||||| || | ||
Sbjct 1533 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATC-TGAGCTCTC 1475
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
||||| || || |||||||| ||||| || || || ||
Sbjct 1474 GACCTCGAGGGTGATAGTCTTTCCAGTTAGGGTCTTAAC 1436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151380239928548
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |