Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq939 192 9e-45 seq924 168 1e-37 >seq939 Length=136056 Score = 192 bits (212), Expect = 9e-45 Identities = 205/268 (76%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||||| | || || ||||||||||||||||||||||| || | Sbjct 58234 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAAGGAATCACCAAGCCGGCCA 58292 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| || ||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 58293 TCCGCCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 58352 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | ||| |||||| || |||| |||| ||| ||| || ||| |||| Sbjct 58353 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCCGTCATCCGTGACGCTGTCACCTACACCG 58412 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || |||||||| ||||||||| | || ||||||| || | || || || | Sbjct 58413 AGCACGCCAAGCGTAAGACCGTCACCTCCCTTGACGTCGTCTACGCTCTCAAGCGCCAGG 58472 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||||| | || ||||| || |||| Sbjct 58473 GCCGTACCCTCTACGGTTTCGGTGGTTA 58500 >seq924 Length=11130 Score = 168 bits (186), Expect = 1e-37 Identities = 189/250 (76%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || ||||| || ||||| |||||||| ||||| Sbjct 7627 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 7569 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || || |||||||| ||||||||| |||| | || |||| || |||| Sbjct 7568 CCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 7509 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| || || |||| ||| ||| || ||| || || Sbjct 7508 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 7449 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | || | ||||| || | || || || || Sbjct 7448 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 7389 Query 16672 CCGTAAGATT 16681 ||||||| || Sbjct 7388 CCGTAAGTTT 7379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074074488083