Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq939 192 9e-45
seq924 168 1e-37
>seq939
Length=136056
Score = 192 bits (212), Expect = 9e-45
Identities = 205/268 (76%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||| || |||| ||||| | || || ||||||||||||||||||||||| || |
Sbjct 58234 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAAGGAATCACCAAGCCGGCCA 58292
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || ||||||||||| ||||||||| |||| | || |||| || ||||
Sbjct 58293 TCCGCCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 58352
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | ||| |||||| || |||| |||| ||| ||| || ||| ||||
Sbjct 58353 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCCGTCATCCGTGACGCTGTCACCTACACCG 58412
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || |||||||| ||||||||| | || ||||||| || | || || || |
Sbjct 58413 AGCACGCCAAGCGTAAGACCGTCACCTCCCTTGACGTCGTCTACGCTCTCAAGCGCCAGG 58472
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||||| | || ||||| || ||||
Sbjct 58473 GCCGTACCCTCTACGGTTTCGGTGGTTA 58500
>seq924
Length=11130
Score = 168 bits (186), Expect = 1e-37
Identities = 189/250 (76%), Gaps = 2/250 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| | | || || ||||| || ||||| |||||||| |||||
Sbjct 7627 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 7569
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| || || |||||||| ||||||||| |||| | || |||| || ||||
Sbjct 7568 CCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 7509
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | |||| ||||||| || || |||| ||| ||| || ||| || ||
Sbjct 7508 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 7449
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||||||||| || | || | ||||| || | || || || ||
Sbjct 7448 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 7389
Query 16672 CCGTAAGATT 16681
||||||| ||
Sbjct 7388 CCGTAAGTTT 7379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074074488083
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |