Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq940 109 5e-19 >seq940 Length=59259 Score = 109 bits (120), Expect = 5e-19 Identities = 247/367 (67%), Gaps = 17/367 (5%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || ||||| || || || || || |||||||| | || || ||| | Sbjct 50208 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTC 50149 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | || |||| | | ||| | || ||| | | | || ||| Sbjct 50148 CATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACCAGCAG 50089 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820 || || || || ||||||||||| ||||||||| | ||| || |||||||| | || | Sbjct 50088 GCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTG-GAGTTCATGCCAAGCAGAC 50030 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAA--ACAT 119878 || || | ||| | |||| ||| |||| |||||| |||| || || |||| | | Sbjct 50029 CGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATGATGT 49970 Query 119879 ACTCAA-CACCTTGGTCTTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATA 119937 || || |||||| | | || | | | |||| | | |||| | | | Sbjct 49969 CCTGAACCACCTTAGGATCGGGGCGGTGGTTCATGT-GGGA-----------GAACAGCA 49922 Query 119938 GACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCA 119997 |||| || ||||| ||||| || || ||||| | || || || |||||| | |||||| Sbjct 49921 GACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCA 49862 Query 119998 AGCCGGG 120004 ||| || Sbjct 49861 GGCCAGG 49855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478655034582320