Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq107 114 1e-20 seq930 87.8 2e-12 >seq107 Length=23034 Score = 114 bits (126), Expect = 1e-20 Identities = 129/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || ||||| |||| ||||| || || ||| |||||| | ||| | |||| Sbjct 1164 ACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGTCC 1223 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||||||||| || || || || |||||||| || || ||||| Sbjct 1224 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCAAG 1283 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| |||||| | || ||||| ||||| ||||| || ||||| Sbjct 1284 CAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCAC 1336 Score = 113 bits (124), Expect = 4e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 ||||| || |||| || || || |||| || || || || | | | |||||| | ||| Sbjct 1436 GTTAAGACCCTAACTGGAAAGACTATCACCCTCGAGGTCGAGAGCTCAGATACCATTGAC 1495 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 | |||| || || || ||||||||||| ||||| ||||| || ||||||||||| Sbjct 1496 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTTATC 1555 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || || ||||| ||| | || ||| || ||| | || |||||||| ||||| ||||| Sbjct 1556 TTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCCTTTCTGATTACAATATTCAGAAAGAG 1615 Query 22411 TCCAC 22415 ||||| Sbjct 1616 TCCAC 1620 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| || || || || |||| || || || || | | | Sbjct 1652 ATGCAAATCTTTGTCAAGACTTTGACAGGAAAGACCATCACACTCGAGGTCGAGAGCTCA 1711 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || || ||||||||||| ||||| ||||| || Sbjct 1712 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 1771 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||| | ||||| || || |||| || || || Sbjct 1772 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAAT 1831 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || ||||| Sbjct 1832 ATTCAGAAGGAGTCCAC 1848 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| || || || || |||| || || || || | | | Sbjct 1880 ATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACACTCGAGGTCGAGAGCTCA 1939 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || || ||||||||||| ||||| ||||| || Sbjct 1940 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 1999 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||| | ||||| || || |||| || || || Sbjct 2000 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAAT 2059 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || ||||| | || | || ||||| |||| || || Sbjct 2060 ATCCAGAAGGAGTCCACTCTCCACCTGGTGTTGCGTCTGCGTGGCGG 2106 >seq930 Length=45409 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 ||||||||||||||| || || || || || || || || || |||||||| ||| | || Sbjct 25068 AGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 25127 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||| |||||| |||| ||||||||||| || || || || ||| Sbjct 25128 GGATGGCCGCACTCTCTCGGATTACAACATCCAGAAGGAGTCGACC 25173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419721702899515