Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq940 149 1e-30 seq716 104 5e-17 >seq940 Length=59259 Score = 149 bits (164), Expect = 1e-30 Identities = 275/402 (68%), Gaps = 6/402 (1%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| || Sbjct 50186 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTA 50127 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || | | |||||| || || ||||| | Sbjct 50126 GCGTTGTAGTACTTCTTGTTGCCGAGAGCCACCAGCAGGCGGTCAGCGACGAACTCGATG 50067 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 |||| | ||| || | ||||||||||||| || || || |||| || ||| | | Sbjct 50066 TACTCGCACATGAGCTTGGAGTTCATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGG 50007 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTGTGCCAGAGAC 251799 || |||| || || | || ||||| | | || ||| ||||| | || Sbjct 50006 AACTCCTGCTCAATGCCGACGGCCTCAACAATGATGTCCTGAACCACCTTAG---GATCG 49950 Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCG 251859 | || | || | ||| |||| || | | || | ||| ||||||||||| Sbjct 49949 GGGCGGTGGTTCATGTGGGAGAACAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCA 49890 Query 251860 CGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAG 251919 ||| ||| | ||||||||| | | |||||||||||||| ||||| ||| | |||||| Sbjct 49889 CGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAG 49830 Query 251920 AAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 ||||| | | || || |||||||| | | |||||||||| Sbjct 49829 AAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 49788 >seq716 Length=65750 Score = 104 bits (114), Expect = 5e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 ||||| || || || |||| |||||| || || || |||| ||||||||||| || Sbjct 63884 AGGTGTTGACCTTTGCAACTGCACTTTCTCCCTGGCTTACGGTGCCAAGATTCTGCTGAA 63825 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | || | ||| | ||||||||||| | || || |||||| |||| ||||| || | Sbjct 63824 CCAGACTCACCTGCGCCTCAAGCGTGGCCAGCGTTACGGTCTCCTCGGCCCCAACGGTTC 63765 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 || |||| ||| || ||||| || || |||| ||||| || || || || || Sbjct 63764 CGGAAAGACCACCCTCATGCGTGCTATCAACAACGAGCAGCTCGAGGGTTTCCCCAAGAA 63705 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || |||||||| ||||||| Sbjct 63704 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTC 63663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027820588765271