Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq940 156 8e-33
seq107 143 5e-29
seq1129 129 1e-24
seq1204 91.5 3e-13
>seq940
Length=59259
Score = 156 bits (172), Expect = 8e-33
Identities = 298/438 (68%), Gaps = 6/438 (1%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || |||||||||||||| |||||| |
Sbjct 50223 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 50164
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
||||| ||| |||||||||||| |||||||| ||| | | ||| || ||
Sbjct 50163 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCC 50104
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | ||||||||| |||||||||||||||| || ||| || | |||||
Sbjct 50103 GAGAGCCACCAGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTT 50044
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||||| || | |||||| | ||||| || ||| |||| || || |||| ||
Sbjct 50043 CATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGC 49984
Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAG---GGACAGCTTGTTCTCGAGCTTCGAATA 10231
|| | | |||| || ||||| | | | || | | |||| | | || |
Sbjct 49983 CTCAACAATGATGTCCTGAACCACCTTAGGATCGGGGCGGTGGTTC---ATGTGGGAGAA 49927
Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291
||| || | || | |||||| |||||||| || ||| | ||||||||| ||
Sbjct 49926 CAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAA 49867
Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351
| ||| || ||||| || || || || |||||||| |||| | ||| || || ||
Sbjct 49866 AGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGA 49807
Query 10352 GAACAGAAGACCCTCCAC 10369
||| | | |||||| ||
Sbjct 49806 GAAGAAGATACCCTCGAC 49789
Score = 84.2 bits (92), Expect = 4e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682
|||||||| | || || || ||| | | || |||||| | |||| ||| ||||||
Sbjct 49477 AGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCAGGACGTGGGAAATGAAG 49418
Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742
| |||||||| |||||||| | ||||||| | ||||| | ||| | | |
Sbjct 49417 TAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATC 49358
Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786
||||| |||||||||| | ||| |||||||||||||||| ||
Sbjct 49357 TCCTCAGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATTTG 49314
>seq107
Length=23034
Score = 143 bits (158), Expect = 5e-29
Identities = 157/206 (76%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||| ||| || |||||||| ||||||||||||||||| ||
Sbjct 1366 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAA 1307
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | || ||||| || |||
Sbjct 1306 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 1247
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413
|| || |||||||| || ||||| | ||||||| ||||| || || |||| | || ||
Sbjct 1246 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATC-GCTGGACTCAAC 1188
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | |||||||||||| || ||||
Sbjct 1187 CTCAAGGGTGATGGTTTTGCCAGTGA 1162
Score = 143 bits (158), Expect = 5e-29
Identities = 162/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || ||||||||||| || || || ||||| ||
Sbjct 1650 CCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAA 1591
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| || ||||| || || | ||| |||||||| |||
Sbjct 1590 AGGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGA 1531
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| || ||||| |||| || ||
Sbjct 1530 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACC 1471
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| | |||||| || ||||| || |||||||| ||||
Sbjct 1470 TCGAGGGTGATAGTCTTTCCAGTTAGGGTCTTAACGA 1434
>seq1129
Length=20362
Score = 129 bits (142), Expect = 1e-24
Identities = 138/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | ||||| || | |||||| |||||||| ||
Sbjct 2164 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 2223
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || |||||||| ||||| || || ||||| | ||||||| |||
Sbjct 2224 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 2283
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| ||| || || || || | ||| ||||| || ||||| ||||||||||||||
Sbjct 2284 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2342
>seq1204
Length=58929
Score = 91.5 bits (100), Expect = 3e-13
Identities = 149/208 (72%), Gaps = 14/208 (7%)
Strand=Plus/Plus
Query 225436 GCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGT--TCGTC 225493
||| ||| |||||||||| ||||||||||| || || | ||| || || ||
Sbjct 50985 GCAGACTTCGTCAAGGAAACCAGAGTCGTGACTGACGATCA-----GACTGGTGATC-TC 51038
Query 225494 AG---GC-CCTTGAGGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTG 225548
|| || |||| |||| | | || ||||| ||||| ||||||| |||||| |
Sbjct 51039 AGTGTGCGCCTTCAGGTAC-TCCTGCAGCCACTTAACGTTTGCCACGTCCAAGTGGTTAG 51097
Query 225549 TAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCT 225608
||||||||||||| || || | ||||| | ||| || || || | | || |||||
Sbjct 51098 TAGGTTCGTCCAGCAGGAGCACATCAGCCTTCTGGAGCATAGCACGGGCCAAAGCCAGCT 51157
Query 225609 TCATTTTCCAGCCCCCGGACAGGGAGCC 225636
|||| |||||||| ||||||||||||||
Sbjct 51158 TCATCTTCCAGCCACCGGACAGGGAGCC 51185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921608218535320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |