Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq940 156 8e-33 seq107 143 5e-29 seq1129 129 1e-24 seq1204 91.5 3e-13 >seq940 Length=59259 Score = 156 bits (172), Expect = 8e-33 Identities = 298/438 (68%), Gaps = 6/438 (1%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 50223 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 50164 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| |||||||| ||| | | ||| || || Sbjct 50163 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCC 50104 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||||||| |||||||||||||||| || ||| || | ||||| Sbjct 50103 GAGAGCCACCAGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTT 50044 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||||| || | |||||| | ||||| || ||| |||| || || |||| || Sbjct 50043 CATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGC 49984 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAG---GGACAGCTTGTTCTCGAGCTTCGAATA 10231 || | | |||| || ||||| | | | || | | |||| | | || | Sbjct 49983 CTCAACAATGATGTCCTGAACCACCTTAGGATCGGGGCGGTGGTTC---ATGTGGGAGAA 49927 Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 ||| || | || | |||||| |||||||| || ||| | ||||||||| || Sbjct 49926 CAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAA 49867 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351 | ||| || ||||| || || || || |||||||| |||| | ||| || || || Sbjct 49866 AGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGA 49807 Query 10352 GAACAGAAGACCCTCCAC 10369 ||| | | |||||| || Sbjct 49806 GAAGAAGATACCCTCGAC 49789 Score = 84.2 bits (92), Expect = 4e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || || || ||| | | || |||||| | |||| ||| |||||| Sbjct 49477 AGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCAGGACGTGGGAAATGAAG 49418 Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742 | |||||||| |||||||| | ||||||| | ||||| | ||| | | | Sbjct 49417 TAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATC 49358 Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 ||||| |||||||||| | ||| |||||||||||||||| || Sbjct 49357 TCCTCAGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATTTG 49314 >seq107 Length=23034 Score = 143 bits (158), Expect = 5e-29 Identities = 157/206 (76%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || |||||||| ||||||||||||||||| || Sbjct 1366 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAA 1307 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || ||| Sbjct 1306 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 1247 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 || || |||||||| || ||||| | ||||||| ||||| || || |||| | || || Sbjct 1246 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATC-GCTGGACTCAAC 1188 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439 || | |||||||||||| || |||| Sbjct 1187 CTCAAGGGTGATGGTTTTGCCAGTGA 1162 Score = 143 bits (158), Expect = 5e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||||||||| || || || ||||| || Sbjct 1650 CCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAA 1591 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || ||||| || || | ||| |||||||| ||| Sbjct 1590 AGGGTACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGA 1531 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| || ||||| |||| || || Sbjct 1530 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACC 1471 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | |||||| || ||||| || |||||||| |||| Sbjct 1470 TCGAGGGTGATAGTCTTTCCAGTTAGGGTCTTAACGA 1434 >seq1129 Length=20362 Score = 129 bits (142), Expect = 1e-24 Identities = 138/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 2164 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 2223 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| ||||| || || ||||| | ||||||| ||| Sbjct 2224 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 2283 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 2284 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2342 >seq1204 Length=58929 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/208 (72%), Gaps = 14/208 (7%) Strand=Plus/Plus Query 225436 GCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGT--TCGTC 225493 ||| ||| |||||||||| ||||||||||| || || | ||| || || || Sbjct 50985 GCAGACTTCGTCAAGGAAACCAGAGTCGTGACTGACGATCA-----GACTGGTGATC-TC 51038 Query 225494 AG---GC-CCTTGAGGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTG 225548 || || |||| |||| | | || ||||| ||||| ||||||| |||||| | Sbjct 51039 AGTGTGCGCCTTCAGGTAC-TCCTGCAGCCACTTAACGTTTGCCACGTCCAAGTGGTTAG 51097 Query 225549 TAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCT 225608 ||||||||||||| || || | ||||| | ||| || || || | | || ||||| Sbjct 51098 TAGGTTCGTCCAGCAGGAGCACATCAGCCTTCTGGAGCATAGCACGGGCCAAAGCCAGCT 51157 Query 225609 TCATTTTCCAGCCCCCGGACAGGGAGCC 225636 |||| |||||||| |||||||||||||| Sbjct 51158 TCATCTTCCAGCCACCGGACAGGGAGCC 51185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921608218535320