Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1016 187 3e-42 seq940 114 2e-20 seq1215 105 8e-18 >seq1016 Length=40071 Score = 187 bits (206), Expect = 3e-42 Identities = 378/558 (68%), Gaps = 11/558 (2%) Strand=Plus/Minus Query 114455 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 114514 ||||| | || ||||||| || ||||| || || |||| |||||| || || Sbjct 23094 ACATAAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTG 23035 Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 114574 ||||| | ||| || || |||| || || || ||| || |||| |||||| || || Sbjct 23034 TACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTA 22975 Query 114575 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 114634 ||| |||| || ||||||||||| |||||| | || | || ||||| || || | | Sbjct 22974 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 22915 Query 114635 TTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC 114693 | |||||| || | ||||| | || | | || | | ||| | | | || ||||||| Sbjct 22914 TCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATAGTCTTGCGGCCACGGCCCTCCTG 22856 Query 114694 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 114753 ||||||||| | |||||| || || ||||| ||||| | | || | || || || || Sbjct 22855 CTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGC 22796 Query 114754 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTC 114813 || | || |||||||| | ||| | ||| ||||||| |||||||||||||| || Sbjct 22795 CTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATC 22736 Query 114814 TGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 114873 || |||| | ||| ||||||| || || ||| | || || | || || || Sbjct 22735 GGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTT 22676 Query 114874 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 114933 |||| || | || || | || ||| ||||||||||| |||||||| | || | | Sbjct 22675 CCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAGC 22616 Query 114934 CCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCG 114987 || | | || |||| |||||| ||||| | || ||| ||||| || || Sbjct 22615 GCC---AGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACACG 22559 Query 114988 AAGCATTGGAATGATACC 115005 ||||| |||| ||||| Sbjct 22558 CAGCATAGGAACAATACC 22541 >seq940 Length=59259 Score = 114 bits (126), Expect = 2e-20 Identities = 300/455 (66%), Gaps = 16/455 (4%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| || || ||||||||||||||||| ||||| || ||| | ||| |||||| Sbjct 50205 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCAT 50146 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 125875 || || || ||||| | | ||| | | || ||| || | | || || Sbjct 50145 GAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACC--AGCAGG 50088 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 || || | |||| |||| |||||||| |||| || |||||||| || | || Sbjct 50087 CGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCATGCCAAGCAGACCG 50028 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || || || ||||| | |||| ||| |||||| | ||||| || | |||| | Sbjct 50027 CAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATGATGTCC 49968 Query 125996 TGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAG-AGTTCCAC-----GGCA 126049 |||| ||||| ||| ||| || || | || | | ||| Sbjct 49967 TGAA------CCACCTTAGGATCGGGGCGGTGGTTCATGTGGGAGAACAGCAGACAGGCG 49914 Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109 || || |||||||||||||||||| ||||| || || || ||||| ||| || ||| Sbjct 49913 AAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGC 49854 Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169 || || || |||||||| | |||||| || | ||||| || ||||||||||| ||| Sbjct 49853 ATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCC 49794 Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 126204 || ||| ||||| |||| |||||| ||| || Sbjct 49793 TCGACAGCGGCGAAGGCAACCAGACGCGAAGCGAA 49759 >seq1215 Length=29760 Score = 105 bits (116), Expect = 8e-18 Identities = 334/505 (66%), Gaps = 31/505 (6%) Strand=Plus/Minus Query 10787 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 10846 ||||| || || || || || | |||||| | ||| || | ||| ||||| || | Sbjct 14159 CGATCGAATCGTCCGGGACGCATGAGGGCCTTGTCGAGAACATCCGGTCGGTTGGTACCG 14100 Query 10847 GCGATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGT-TGA 10903 || | |||||| | ||| || | ||| ||||||||||||||||| |||| | || Sbjct 14099 GCCAGGACAACCACTTGCTCGGA--GGTATTGAAGCCATCCATCTCAGT-AAGAATCTGG 14043 Query 10904 TTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCACC--CGCACTGCGTTGCT--- 10958 |||| || ||| || || || || | |||||| || | | ||||| Sbjct 14042 TTGAGAGTGCTTTCACGCTCGTCGTTTCC------ACCACCAACGTTCGACTTTGCTCGG 13989 Query 10959 ----TACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGT-TGATTTTCACGGGC 11013 | || | || || |||||||| ||||||| ||| || || || | ||| ||||| Sbjct 13988 GACTTTCCAATAGCATCGATTTCATCAATGAAAATGATGCAGGGGGTGTTCTTC-CGGGC 13930 Query 11014 AACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATT 11073 | | |||| || ||||| | || ||||||||| ||||||||||| || || | Sbjct 13929 ATTGGCGAAGAGGTCGCGGACACGAGAGGGACCGACACCGACAAACATTTCGACGAACTC 13870 Query 11074 GG--CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 11131 || | | | ||| || | ||| || ||| |||||||| || |||| || || Sbjct 13869 GGAACCACTG-ACACTGTA-GAAAGGCACGCCAGATTCACCAGCAGTGGCCTTAGCAAGC 13812 Query 11132 AGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC- 11190 | ||||| || || || || |||| ||||| |||||||| |||||| | ||||| Sbjct 13811 AATGTCTTACCAGTTCCGGGGGGACCTGAGAGAATAGCACCACGGGGGATCTTTGCACCC 13752 Query 11191 -ACTTCCAAAGTAGCGCTCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCATCCT 11249 |||| | | ||||| ||||| | |||||| |||| ||| | ||| ||| Sbjct 13751 AGCTTC--TCGAACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCT 13694 Query 11250 TCGCAGCGTCGATGCCTTCAACGTC 11274 | || |||| ||||| ||||||| Sbjct 13693 TGGCTTCGTCCATGCCGGCAACGTC 13669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597344408221480