Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq107 125 8e-24
seq1129 96.9 4e-15
>seq107
Length=23034
Score = 125 bits (138), Expect = 8e-24
Identities = 162/220 (74%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||||||||| || | ||| |||||| || ||||| || || | ||||| || |
Sbjct 2095 ACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCC 2036
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || ||||||||||||||||| || || ||||||||||||| || | || ||||||
Sbjct 2035 GTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTT 1976
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168
|||| ||| || |||| ||| | | | || || |||| || || |||| |
Sbjct 1975 GTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCTGAGCTC---TCGACCTCGAGTG 1920
Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||||| || || || | ||||| ||||||||||||||
Sbjct 1919 TGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 1880
Score = 120 bits (132), Expect = 3e-22
Identities = 150/202 (74%), Gaps = 8/202 (4%)
Strand=Plus/Minus
Query 42011 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 42070
|||| |||||| |||||||| || || | ||||| || |||| || |||||||||||
Sbjct 1849 TGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACC 1790
Query 42071 AGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 42130
|||||| || || ||||||||||||| || | || |||||||||| ||| || ||
Sbjct 1789 AGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 1730
Query 42131 GAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTA 42186
|| ||| | | | || || |||| || || |||| |||||||| || || || |
Sbjct 1729 GA-CGTTGTCAATGGTATCTGAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCTGTCA 1674
Query 42187 GCGTCTTTACAAAGATTTGCAT 42208
||||| ||||||||||||||
Sbjct 1673 AAGTCTTGACAAAGATTTGCAT 1652
Score = 93.3 bits (102), Expect = 5e-14
Identities = 137/190 (72%), Gaps = 8/190 (4%)
Strand=Plus/Minus
Query 42011 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 42070
|||| ||| || |||||||||||||||| || || || | || || |||||||| ||
Sbjct 1621 TGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCTTCAAGCTGCTTGCC 1562
Query 42071 AGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 42130
|||||| || || || |||||||||| || | || |||||||||| ||| || ||
Sbjct 1561 AGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 1502
Query 42131 GAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTA 42186
|| ||| | | | || || |||| || || |||| ||||| || || || ||||
Sbjct 1501 GA-CGTTGTCAATGGTATCTGAGCTC---TCGACCTCGAGGGTGATAGTCTTTCCAGTTA 1446
Query 42187 GCGTCTTTAC 42196
| ||||| ||
Sbjct 1445 GGGTCTTAAC 1436
Score = 91.5 bits (100), Expect = 2e-13
Identities = 123/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||||||||| || || ||||| | || || || | || || |||||||| ||||||||
Sbjct 1331 CTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 1272
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || ||||||||||| | || | | |||||||||| ||| || |||| |||
Sbjct 1271 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1213
Query 42137 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184
| | | || ||||| || || || || | |||||||||||||| ||
Sbjct 1212 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 1164
>seq1129
Length=20362
Score = 96.9 bits (106), Expect = 4e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078
|||| || || ||||| || ||| || || | || || |||||||| || ||||| |
Sbjct 2162 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 2221
Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138
| || ||||||||||| | || | || |||||| ||| ||| || |||| ||| |
Sbjct 2222 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 2280
Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||||||||||| || ||||||| || ||||| || ||||| || ||||| ||
Sbjct 2281 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2340
Query 42198 AA 42199
||
Sbjct 2341 AA 2342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543204441313040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |