Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq940 176 4e-39 seq1129 87.8 2e-12 >seq940 Length=59259 Score = 176 bits (194), Expect = 4e-39 Identities = 308/446 (69%), Gaps = 23/446 (5%) Strand=Plus/Plus Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461 |||| ||||||||| |||||||| | || || || ||| || ||| ||||||| | Sbjct 49772 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCT 49831 Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521 |||| | | ||| | ||||| |||||||| ||| ||||||| |||| || || | Sbjct 49832 GGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGTG 49891 Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACCG 52575 |||| || || ||||| ||||| || || || || | ||| || | | ||| Sbjct 49892 ACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 49951 Query 52576 AA---AAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAA 52632 | || ||| | ||||| || |||| ||||| || | || || Sbjct 49952 ATCCTAAGGTGGTTCAGGACATCAT--------TGTT----GAGGCCGTCGGCATTGAGC 49999 Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGT 52692 ||||||| |||| | ||| || || || ||||| ||||||||| | || ||||| Sbjct 50000 AGGAGTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGT 50059 Query 52693 GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTAC 52751 |||||||||||||||| || || || || ||| ||||| ||| |||| | | |||||| Sbjct 50060 GCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGCTCTC-GGCAACAAGAAGTAC 50118 Query 52752 TTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAAC 52811 | ||||||| ||| || || || || ||| | ||| || || | |||||||||||| Sbjct 50119 TACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAAC 50178 Query 52812 TTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || ||||||||||| ||||| || || Sbjct 50179 TTCTTCGAGAAGCGTGTCGGTGACTA 50204 >seq1129 Length=20362 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 2162 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 2221 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | || ||||| ||||| || || || || || || || || | || || || | ||| Sbjct 2222 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATC-CTGGATCTTGGTCTTGACGTTG 2280 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 2281 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 2339 Query 138603 AAAA 138606 ||| Sbjct 2340 GAAA 2343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496254763762320