Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1016 187 3e-42
seq940 131 2e-25
seq1215 100 3e-16
>seq1016
Length=40071
Score = 187 bits (206), Expect = 3e-42
Identities = 567/864 (66%), Gaps = 13/864 (2%)
Strand=Plus/Minus
Query 116416 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 116475
||||| | || ||||||| || ||||| || || |||| |||||| || ||
Sbjct 23094 ACATAAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTG 23035
Query 116476 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 116535
||||| | ||| || || |||| || || || ||| || |||| |||||| || ||
Sbjct 23034 TACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTA 22975
Query 116536 GACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGAC 116595
||| |||| || ||||||||||||||||| | || | || ||||| || || | |
Sbjct 22974 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 22915
Query 116596 TTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC 116654
| |||||| || | ||| | | || | | || | | ||| | | | || |||||||
Sbjct 22914 TCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATAGTCTTGCGGCCACGGCCCTCCTG 22856
Query 116655 CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGC 116714
||||||||| | |||||| || || ||||| ||||| | || | || || || ||
Sbjct 22855 CTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGC 22796
Query 116715 CTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 116774
|| | ||||||||||| | ||| | ||| ||||||| |||||||||||||| ||
Sbjct 22795 CTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATC 22736
Query 116775 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 116834
|| |||| | || ||||||| || || ||| | || || | || || ||
Sbjct 22735 GGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTT 22676
Query 116835 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 116894
|||| || | || || | || ||| ||||||||||| |||||||| | || | |
Sbjct 22675 CCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAGC 22616
Query 116895 CCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAG 116951
|| ||| |||| |||||| ||||| | || || |||||| || || ||
Sbjct 22615 GCCAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACACGCAG 22556
Query 116952 CATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCT 117009
||| |||| ||||| | || ||| || || || | || ||||| || | | ||
Sbjct 22555 CATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGA-AC-CGGTAGCG 22498
Query 117010 CTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCC 117069
| | ||||| || || ||| ||||| || || ||| ||||| || || |
Sbjct 22497 CGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGGTC 22438
Query 117070 GTGAGACTGCCGTAGATCCCATCGATCGAGTC-ACCCTTATTTGCGATGAGGAAGCAGCT 117128
||||| || | ||||| || || || ||| | || | | | | ||||||||
Sbjct 22437 TTGAGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCACGT-CAACCAGGAAGCAAGA 22379
Query 117129 CGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACAT 117188
| | || ||| || ||| | || ||||| | || || | ||||| |||| |
Sbjct 22378 TGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAA-GT 22320
Query 117189 ACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATAC 117247
|| | ||||||||| | ||| ||||| | | | |||||| || |||||||| |
Sbjct 22319 ACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTC 22260
Query 117248 CGATTGAGACCCGCATAAACATGT 117271
||| | || ||||| | || ||
Sbjct 22259 CGACGGCAACACGCATGAGCAAGT 22236
>seq940
Length=59259
Score = 131 bits (144), Expect = 2e-25
Identities = 299/447 (67%), Gaps = 16/447 (4%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| ||||||
Sbjct 50205 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCAT 50146
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 127348
|| || || ||||| | | ||| | | || ||| || | | || ||
Sbjct 50145 GAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACC--AGCAGG 50088
Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408
|| || | |||| |||| |||||||| |||| || |||||||| || | ||
Sbjct 50087 CGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCATGCCAAGCAGACCG 50028
Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468
|| || || ||||| | |||| ||| ||||||| | || || || | |||| |
Sbjct 50027 CAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATGATGTCC 49968
Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAG-AGTTCCACAG-----CA 127522
|||| ||||| ||| ||| || || | || | ||| |
Sbjct 49967 TGAA------CCACCTTAGGATCGGGGCGGTGGTTCATGTGGGAGAACAGCAGACAGGCG 49914
Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582
|| || |||||||||||||||||| ||||| || || || ||||| ||| || |||
Sbjct 49913 AAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGC 49854
Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642
|| || || |||||||| | |||||| || | |||||||||||||||||||| |||
Sbjct 49853 ATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCC 49794
Query 127643 TCCACACACGCGAACGCAAATAGACGC 127669
|| ||| ||||| |||| ||||||
Sbjct 49793 TCGACAGCGGCGAAGGCAACCAGACGC 49767
>seq1215
Length=29760
Score = 100 bits (110), Expect = 3e-16
Identities = 333/505 (66%), Gaps = 31/505 (6%)
Strand=Plus/Minus
Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761
||||| || || || || || | |||||| | ||| || | ||| ||||| || |
Sbjct 14159 CGATCGAATCGTCCGGGACGCATGAGGGCCTTGTCGAGAACATCCGGTCGGTTGGTACCG 14100
Query 12762 GCGATGACAACGA--TGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGT-TGA 12818
|| | |||||| | ||| || | ||| |||||||||||||||||| |||| | ||
Sbjct 14099 GCCAGGACAACCACTTGCTCGGA--GGTATTGAAGCCATCCATCTCAGT-AAGAATCTGG 14043
Query 12819 TTGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCACC--CGCACTGCGTTGCT--- 12873
|||| || |||||| || || || | |||||| || | | |||||
Sbjct 14042 TTGAGAGTGCTTTCACGCTCGTCGTTTCC------ACCACCAACGTTCGACTTTGCTCGG 13989
Query 12874 ----TACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGT-TGATTTTCACGGGC 12928
| || | || || ||||| |||||||||| ||| || || || | ||| |||||
Sbjct 13988 GACTTTCCAATAGCATCGATTTCATCAATGAAAATGATGCAGGGGGTGTTCTTC-CGGGC 13930
Query 12929 AACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 12988
| | |||| || || || | || ||||||||| |||||||| || || || |
Sbjct 13929 ATTGGCGAAGAGGTCGCGGACACGAGAGGGACCGACACCGACAAACATTTCGACGAACTC 13870
Query 12989 GG--CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 13046
|| | | || || || | ||| || ||| |||||||| || |||| || ||
Sbjct 13869 GGAACCACTGA-CACTGTA-GAAAGGCACGCCAGATTCACCAGCAGTGGCCTTAGCAAGC 13812
Query 13047 AGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 13106
| ||||| || || || || || | ||||| |||||||| |||||| | |||||
Sbjct 13811 AATGTCTTACCAGTTCCGGGGGGACCTGAGAGAATAGCACCACGGGGGATCTTTGCACCC 13752
Query 13107 --CTTCCAAAGTAGCGCTCGGGTTGTTTAAGAAAGTCCACGATTTCTTCCAATTCATCCT 13164
|||| | | ||||||||||| | || ||| |||| ||| | ||| |||
Sbjct 13751 AGCTTCTCGA--ACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCT 13694
Query 13165 TCGCGGCGTCGATGCCTTCAACGTC 13189
| || |||| ||||| |||||||
Sbjct 13693 TGGCTTCGTCCATGCCGGCAACGTC 13669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613497759657960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |