Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1016 187 3e-42 seq940 131 2e-25 seq1215 100 3e-16 >seq1016 Length=40071 Score = 187 bits (206), Expect = 3e-42 Identities = 567/864 (66%), Gaps = 13/864 (2%) Strand=Plus/Minus Query 116416 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 116475 ||||| | || ||||||| || ||||| || || |||| |||||| || || Sbjct 23094 ACATAAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTG 23035 Query 116476 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 116535 ||||| | ||| || || |||| || || || ||| || |||| |||||| || || Sbjct 23034 TACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTA 22975 Query 116536 GACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGAC 116595 ||| |||| || ||||||||||||||||| | || | || ||||| || || | | Sbjct 22974 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 22915 Query 116596 TTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC 116654 | |||||| || | ||| | | || | | || | | ||| | | | || ||||||| Sbjct 22914 TCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATAGTCTTGCGGCCACGGCCCTCCTG 22856 Query 116655 CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGC 116714 ||||||||| | |||||| || || ||||| ||||| | || | || || || || Sbjct 22855 CTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGC 22796 Query 116715 CTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 116774 || | ||||||||||| | ||| | ||| ||||||| |||||||||||||| || Sbjct 22795 CTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATC 22736 Query 116775 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 116834 || |||| | || ||||||| || || ||| | || || | || || || Sbjct 22735 GGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTT 22676 Query 116835 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 116894 |||| || | || || | || ||| ||||||||||| |||||||| | || | | Sbjct 22675 CCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAGC 22616 Query 116895 CCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAG 116951 || ||| |||| |||||| ||||| | || || |||||| || || || Sbjct 22615 GCCAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACACGCAG 22556 Query 116952 CATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCT 117009 ||| |||| ||||| | || ||| || || || | || ||||| || | | || Sbjct 22555 CATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGA-AC-CGGTAGCG 22498 Query 117010 CTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCC 117069 | | ||||| || || ||| ||||| || || ||| ||||| || || | Sbjct 22497 CGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGGTC 22438 Query 117070 GTGAGACTGCCGTAGATCCCATCGATCGAGTC-ACCCTTATTTGCGATGAGGAAGCAGCT 117128 ||||| || | ||||| || || || ||| | || | | | | |||||||| Sbjct 22437 TTGAGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCACGT-CAACCAGGAAGCAAGA 22379 Query 117129 CGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACAT 117188 | | || ||| || ||| | || ||||| | || || | ||||| |||| | Sbjct 22378 TGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAA-GT 22320 Query 117189 ACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATAC 117247 || | ||||||||| | ||| ||||| | | | |||||| || |||||||| | Sbjct 22319 ACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTC 22260 Query 117248 CGATTGAGACCCGCATAAACATGT 117271 ||| | || ||||| | || || Sbjct 22259 CGACGGCAACACGCATGAGCAAGT 22236 >seq940 Length=59259 Score = 131 bits (144), Expect = 2e-25 Identities = 299/447 (67%), Gaps = 16/447 (4%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| |||||| Sbjct 50205 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCAT 50146 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || ||||| | | ||| | | || ||| || | | || || Sbjct 50145 GAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACC--AGCAGG 50088 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 || || | |||| |||| |||||||| |||| || |||||||| || | || Sbjct 50087 CGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCATGCCAAGCAGACCG 50028 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || || || ||||| | |||| ||| ||||||| | || || || | |||| | Sbjct 50027 CAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATGATGTCC 49968 Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAG-AGTTCCACAG-----CA 127522 |||| ||||| ||| ||| || || | || | ||| | Sbjct 49967 TGAA------CCACCTTAGGATCGGGGCGGTGGTTCATGTGGGAGAACAGCAGACAGGCG 49914 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || |||||||||||||||||| ||||| || || || ||||| ||| || ||| Sbjct 49913 AAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGC 49854 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 || || || |||||||| | |||||| || | |||||||||||||||||||| ||| Sbjct 49853 ATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCC 49794 Query 127643 TCCACACACGCGAACGCAAATAGACGC 127669 || ||| ||||| |||| |||||| Sbjct 49793 TCGACAGCGGCGAAGGCAACCAGACGC 49767 >seq1215 Length=29760 Score = 100 bits (110), Expect = 3e-16 Identities = 333/505 (66%), Gaps = 31/505 (6%) Strand=Plus/Minus Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761 ||||| || || || || || | |||||| | ||| || | ||| ||||| || | Sbjct 14159 CGATCGAATCGTCCGGGACGCATGAGGGCCTTGTCGAGAACATCCGGTCGGTTGGTACCG 14100 Query 12762 GCGATGACAACGA--TGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGT-TGA 12818 || | |||||| | ||| || | ||| |||||||||||||||||| |||| | || Sbjct 14099 GCCAGGACAACCACTTGCTCGGA--GGTATTGAAGCCATCCATCTCAGT-AAGAATCTGG 14043 Query 12819 TTGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCACC--CGCACTGCGTTGCT--- 12873 |||| || |||||| || || || | |||||| || | | ||||| Sbjct 14042 TTGAGAGTGCTTTCACGCTCGTCGTTTCC------ACCACCAACGTTCGACTTTGCTCGG 13989 Query 12874 ----TACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGT-TGATTTTCACGGGC 12928 | || | || || ||||| |||||||||| ||| || || || | ||| ||||| Sbjct 13988 GACTTTCCAATAGCATCGATTTCATCAATGAAAATGATGCAGGGGGTGTTCTTC-CGGGC 13930 Query 12929 AACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 12988 | | |||| || || || | || ||||||||| |||||||| || || || | Sbjct 13929 ATTGGCGAAGAGGTCGCGGACACGAGAGGGACCGACACCGACAAACATTTCGACGAACTC 13870 Query 12989 GG--CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 13046 || | | || || || | ||| || ||| |||||||| || |||| || || Sbjct 13869 GGAACCACTGA-CACTGTA-GAAAGGCACGCCAGATTCACCAGCAGTGGCCTTAGCAAGC 13812 Query 13047 AGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 13106 | ||||| || || || || || | ||||| |||||||| |||||| | ||||| Sbjct 13811 AATGTCTTACCAGTTCCGGGGGGACCTGAGAGAATAGCACCACGGGGGATCTTTGCACCC 13752 Query 13107 --CTTCCAAAGTAGCGCTCGGGTTGTTTAAGAAAGTCCACGATTTCTTCCAATTCATCCT 13164 |||| | | ||||||||||| | || ||| |||| ||| | ||| ||| Sbjct 13751 AGCTTCTCGA--ACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCT 13694 Query 13165 TCGCGGCGTCGATGCCTTCAACGTC 13189 | || |||| ||||| ||||||| Sbjct 13693 TGGCTTCGTCCATGCCGGCAACGTC 13669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613497759657960