Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq107 123 6e-23
seq1129 109 1e-18
seq930 96.9 8e-15
seq1016 95.1 3e-14
>seq107
Length=23034
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480
|| ||||||||||| |||||||| |||| || ||||| | | ||| | ||| || |||
Sbjct 2088 ACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 2029
Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540
|||||||| || |||||||| |||||||||||||| || ||| || || |||||
Sbjct 2028 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 1969
Query 199541 ATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTA 199600
||||| ||| ||| || | ||| |||| | || || || | ||||| |||||
Sbjct 1968 ATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTT 1909
Query 199601 CCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || | ||| || ||||| |||||
Sbjct 1908 CCAGTCAAAGTCTTGACAAAGATTTG 1883
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||||||||| || || |||||||| || | || ||||| | | ||| | ||| ||
Sbjct 1863 AGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCC 1804
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || |||||||| |||||||||||||| || ||| || || |||
Sbjct 1803 TCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1744
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| || | ||| |||| | || || || | ||||| |||
Sbjct 1743 TGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTC 1684
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | ||| || ||||| |||||
Sbjct 1683 TTTCCTGTCAAAGTCTTGACAAAGATTTG 1655
Score = 109 bits (120), Expect = 1e-18
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||||||||| ||||||||||||| ||| || || | | || | |||||
Sbjct 1351 AGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCC 1292
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| |||||||||||||| ||| ||| || || |||
Sbjct 1291 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 1232
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| || || | | || || || | ||||| ||
Sbjct 1231 TGGATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTT 1172
Query 199598 TTACCCGTGA 199607
|| || ||||
Sbjct 1171 TTGCCAGTGA 1162
Score = 100 bits (110), Expect = 7e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||||||||| || || ||||| || || | ||||| |||| | || | ||||||
Sbjct 1635 AGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCT 1576
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| ||||| |||||||| || ||| || || |||
Sbjct 1575 TCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1516
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| || | ||| |||| | || || || | ||||| |||
Sbjct 1515 TGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTC 1456
Query 199598 TTACCCGTGAGAGTTTTCAC 199617
|| || || || || || ||
Sbjct 1455 TTTCCAGTTAGGGTCTTAAC 1436
>seq1129
Length=20362
Score = 109 bits (120), Expect = 1e-18
Identities = 147/203 (72%), Gaps = 4/203 (2%)
Strand=Plus/Plus
Query 199423 AAGGTGGAGAGTCGA---CT-CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTT 199478
||||| || ||||| || |||| |||| ||||||||| || || | ||||| |
Sbjct 2141 AAGGTTGAAGGTCGATCCCTACCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCT 2200
Query 199479 CCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCT 199538
| |||||||||||||||||||| || ||||||||||| || ||| || || ||||
Sbjct 2201 CGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCT 2260
Query 199539 GAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCT 199598
| ||||| ||| ||| |||| |||||| | | || ||||| | || || ||||
Sbjct 2261 GGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCT 2320
Query 199599 TACCCGTGAGAGTTTTCACAAAA 199621
||||||| || || || || |||
Sbjct 2321 TACCCGTCAGGGTCTTGACGAAA 2343
>seq930
Length=45409
Score = 96.9 bits (106), Expect = 8e-15
Identities = 82/101 (81%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || ||||||||||| |||| |||||| || | | ||| | |||||
Sbjct 25187 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCC 25128
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||| ||||||||||| || ||||||||||| ||
Sbjct 25127 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 25087
>seq1016
Length=40071
Score = 95.1 bits (104), Expect = 3e-14
Identities = 168/245 (69%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827
|| |||||||||| |||||||| ||||| ||| | |||||| | | |||| || |
Sbjct 22959 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTAC 22900
Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887
|| || | || || || | || | | | | || || | ||||| || | |||
Sbjct 22899 CAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTCGCGTAG 22840
Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 167947
|| | ||||| || | ||||| | || | || ||||| || || || ||||| |||
Sbjct 22839 AGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGCCTCGTTGGGACAGAAG 22780
Query 167948 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 168007
|| |||| | || | || ||| || | |||||||||||| |||| |||||| | |||
Sbjct 22779 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAGTCCACAAAGCG 22720
Query 168008 TAGAA 168012
|||||
Sbjct 22719 TAGAA 22715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178903005827477
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |