Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq1129 132 5e-26
seq107 132 5e-26
seq930 98.7 1e-15
>seq1129
Length=20362
Score = 132 bits (146), Expect = 5e-26
Identities = 140/182 (77%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||| || ||||| | || ||||||||||| |||||||| |
Sbjct 2162 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 2221
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | || |||||| ||| |||||| |||||| ||| |
Sbjct 2222 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 2280
Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||||||||| || ||||| | || ||||| || |||||||| || || ||
Sbjct 2281 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2340
Query 46583 AA 46584
||
Sbjct 2341 AA 2342
>seq107
Length=23034
Score = 132 bits (146), Expect = 5e-26
Identities = 177/242 (73%), Gaps = 8/242 (3%)
Strand=Plus/Minus
Query 46356 TATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATAT 46415
|| |||| | ||| || | | |||||||||||| || | || |||||| |||||||
Sbjct 2117 TAAATTACTGGCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATAT 2058
Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475
| ||||| || ||||| || |||| || |||||||| || ||||| || | |||||||
Sbjct 2057 TATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCT 1998
Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC- 46533
|||||| || | || |||||||||| |||||| ||||| ||| | | | || ||
Sbjct 1997 GGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCT 1939
Query 46534 --GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGC 46591
|||| || || || | |||||||| || || |||| || || ||||||||||||
Sbjct 1938 GAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGC 1882
Query 46592 AT 46593
||
Sbjct 1881 AT 1880
Score = 113 bits (124), Expect = 5e-20
Identities = 145/196 (74%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || ||||| ||||| || ||||| || |||| || |||||||| || |||||
Sbjct 1843 CTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAA 1784
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||||| || | || |||||||||| |||||| ||||| |||
Sbjct 1783 GATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1725
Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577
| | | || || |||| || || || | |||||||| || || |||| || |
Sbjct 1724 TGTCAATGGTATCTGAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTCT 1668
Query 46578 TAACAAAGATTTGCAT 46593
| ||||||||||||||
Sbjct 1667 TGACAAAGATTTGCAT 1652
Score = 104 bits (114), Expect = 3e-17
Identities = 126/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| || || || || || ||||| | || || ||||||||||| |||||
Sbjct 1331 CTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 1272
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | | |||||||||| |||||| ||||| |||
Sbjct 1271 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1213
Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | | || ||||| || || || || | |||||||||||||| ||
Sbjct 1212 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 1164
>seq930
Length=45409
Score = 98.7 bits (108), Expect = 1e-15
Identities = 83/102 (81%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || || |||||||| | || ||||||||||||||||||||
Sbjct 25167 CTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 25108
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||| |||||||||||| | || | | ||||||||| ||
Sbjct 25107 GATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTAT 25066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565229702394120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |