Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq107 179 8e-40 seq1129 104 5e-17 seq930 95.1 3e-14 seq1016 91.5 3e-13 >seq107 Length=23034 Score = 179 bits (198), Expect = 8e-40 Identities = 159/199 (80%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| ||||||||||| |||||||||||||| | ||| || | |||||||| Sbjct 1632 ACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCTTCA 1573 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| ||||| ||||| || |||||||| || ||||| || Sbjct 1572 AGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 1513 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| |||||||| || || || || || || ||||| | |||||| Sbjct 1512 ATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTCTTT 1453 Query 195112 CCTGTCAAAGTTTTTACGA 195130 || || | || || |||| Sbjct 1452 CCAGTTAGGGTCTTAACGA 1434 Score = 174 bits (192), Expect = 3e-38 Identities = 164/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| |||||||| || |||||||| || || | ||||| | || || || Sbjct 1860 ACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 1801 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| ||||||||||| || || ||||| || |||||||| || ||||| || Sbjct 1800 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 1741 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| |||||||| || || || || || || || || | |||||| Sbjct 1740 ATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTT 1681 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||||||||| || || || | |||||| Sbjct 1680 CCTGTCAAAGTCTTGACAAAGATTTGCAT 1652 Score = 163 bits (180), Expect = 6e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || ||||| ||||||||||| || || ||||| || || | ||||| | || || Sbjct 2092 CAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTC 2033 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || ||||||||||| ||||||||||| || || ||||| || |||||||| || ||||| Sbjct 2032 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 1973 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || || || ||||||||| |||||||| || || || || || || || || | || Sbjct 1972 CTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGT 1913 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||| |||||||| || || || | |||||| Sbjct 1912 CTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 1880 Score = 120 bits (132), Expect = 7e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| ||||| || || ||||| | ||| || | ||||| || Sbjct 1348 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 1289 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| || || ||||| |||||||| || || ||||| || Sbjct 1288 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 1229 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||||||||| || || || || Sbjct 1228 ATCTTGGACTTGACGTTGTCGATAGTATC 1200 >seq1129 Length=20362 Score = 104 bits (114), Expect = 5e-17 Identities = 133/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| || || | ||||| ||||||||||| || |||||||| Sbjct 2164 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 2223 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || |||||||| || || || || || || ||||||||| || Sbjct 2224 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 2283 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || |||| || || ||| Sbjct 2284 ATGGTGTCGCTCGA---CTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2340 Query 195130 AA 195131 || Sbjct 2341 AA 2342 >seq930 Length=45409 Score = 95.1 bits (104), Expect = 3e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || |||||||| | ||||| | ||||| ||| Sbjct 25184 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCCTCG 25125 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| || || || ||||| || || || || || |||||| Sbjct 25124 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCT 25068 >seq1016 Length=40071 Score = 91.5 bits (100), Expect = 3e-13 Identities = 184/273 (67%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 |||||||| | |||||| ||||||| ||||||||| | || | | ||| || || ||| Sbjct 22715 TTCTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGG 22774 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | || ||||||||||| || || || || || | |||||| || ||| |||||||| Sbjct 22775 ACACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGATGAGTTCGAC 22834 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768 |||| || | | ||||| | ||||| | | | ||| | ||||| || | Sbjct 22835 GCTCTCTACGCGAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACTATCAAGGCTCAGAAG 22894 Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828 || ||| | ||| || | || || ||| |||| ||||| || |||||| Sbjct 22895 CTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATGCTCTACAAG 22954 Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861 ||||| | |||||||||||||||||| Sbjct 22955 GATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 22987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109464101048177