Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq107 104 2e-17
>seq107
Length=23034
Score = 104 bits (114), Expect = 2e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| |||| || |||||||| ||||||||||| || | ||| | || ||||||||
Sbjct 1855 GTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTG 1796
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
|| || || || || || || |||||||| | || | ||||||||||| |||||
Sbjct 1795 CTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 1736
Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957
|||||| | || | || | ||| || |||| || ||||| ||||| ||
Sbjct 1735 GGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCTGT 1676
Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982
| |||||| |||||||| ||||||
Sbjct 1675 CAAAGTCTTGACAAAGATTTGCATA 1651
Score = 98.7 bits (108), Expect = 6e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| |||| ||| | ||| || ||||| || ||||||||||| || | ||| | ||
Sbjct 2092 CAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTC 2033
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|||||||| || || || || || || || |||||||| | || | |||||||||||
Sbjct 2032 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 1973
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948
||||| |||||| | || | || | ||| || |||| || |||||
Sbjct 1972 CTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGT 1913
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| || | |||||| |||||||| ||||||
Sbjct 1912 CTTTCCAGTCAAAGTCTTGACAAAGATTTGCATA 1879
Score = 86.0 bits (94), Expect = 4e-12
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || || || |||||||| ||||||||| | || |||| ||
Sbjct 1348 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 1289
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || |||||||| | || | |||||||||||
Sbjct 1288 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 1229
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | || | || |||||| || | ||| ||||||||
Sbjct 1228 ATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTG 1169
Query 34953 CCCGTGA 34959
|| ||||
Sbjct 1168 CCAGTGA 1162
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| |||| ||||||||||| || || || |||||| | || |||| || |||||
Sbjct 1627 GTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCTTCAAGCTG 1568
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
|| || || || || || ||||||||||| | || | ||||||||||| |||||
Sbjct 1567 CTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 1508
Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957
|||||| | || | || | ||| || |||| ||| || || ||||| ||
Sbjct 1507 GGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTCTTTCCAGT 1448
Query 34958 GAGAGTCTTCAC 34969
|| ||||| ||
Sbjct 1447 TAGGGTCTTAAC 1436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324628729582968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |