Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq107 104 2e-17 >seq107 Length=23034 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| |||| || |||||||| ||||||||||| || | ||| | || |||||||| Sbjct 1855 GTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTG 1796 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || || || |||||||| | || | ||||||||||| ||||| Sbjct 1795 CTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 1736 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 |||||| | || | || | ||| || |||| || ||||| ||||| || Sbjct 1735 GGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTTCCTGT 1676 Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982 | |||||| |||||||| |||||| Sbjct 1675 CAAAGTCTTGACAAAGATTTGCATA 1651 Score = 98.7 bits (108), Expect = 6e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||| ||| | ||| || ||||| || ||||||||||| || | ||| | || Sbjct 2092 CAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTC 2033 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||||||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 2032 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 1973 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| |||||| | || | || | ||| || |||| || ||||| Sbjct 1972 CTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGT 1913 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || | |||||| |||||||| |||||| Sbjct 1912 CTTTCCAGTCAAAGTCTTGACAAAGATTTGCATA 1879 Score = 86.0 bits (94), Expect = 4e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || || || |||||||| ||||||||| | || |||| || Sbjct 1348 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 1289 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 1288 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 1229 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | || |||||| || | ||| |||||||| Sbjct 1228 ATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTG 1169 Query 34953 CCCGTGA 34959 || |||| Sbjct 1168 CCAGTGA 1162 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| |||| ||||||||||| || || || |||||| | || |||| || ||||| Sbjct 1627 GTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGACCATCTTCAAGCTG 1568 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || || ||||||||||| | || | ||||||||||| ||||| Sbjct 1567 CTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 1508 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 |||||| | || | || | ||| || |||| ||| || || ||||| || Sbjct 1507 GGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTCTTTCCAGT 1448 Query 34958 GAGAGTCTTCAC 34969 || ||||| || Sbjct 1447 TAGGGTCTTAAC 1436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324628729582968