Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq432 86.0 5e-11 seq107 86.0 5e-11 >seq432 Length=17579 Score = 86.0 bits (94), Expect = 5e-11 Identities = 172/255 (67%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | |||||||| || ||||| ||||| | | ||| ||||| Sbjct 9193 GGTATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGCGATGACCGCATTGAA 9134 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||| || || |||||| | || || || || | || |||||| || || Sbjct 9133 ATCATTGCCAACGACCAGGGTAACCGCACCACCCCCTCGTTCGTCGGTTTCACCGACACC 9074 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 || | | | | |||||||| || || | |||| | | || || ||| ||| | Sbjct 9073 GAGCGTCTCATCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCCCACAACACTGTC 9014 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 || |||||||| ||| | ||||| | | || | ||| | || ||||| |||||| Sbjct 9013 TTCGATGCTAAGCGTCTCATTGGTCGCCGCTTCCAGGATGCTGAGGTCCAGGCCGATATG 8954 Query 550238 AAGCATTGGCCTTTC 550252 ||||| ||||||||| Sbjct 8953 AAGCACTGGCCTTTC 8939 >seq107 Length=23034 Score = 86.0 bits (94), Expect = 5e-11 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| ||||| ||||| || ||||| |||||||||||||| || || | Sbjct 1641 AGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGA 1582 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||||||| || || || || || ||||| | |||||| || || ||||| || || Sbjct 1581 CCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCC 1522 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGT 563435 || || || || || || || ||||| ||||| | | | || ||||| || Sbjct 1521 TTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGAC-CTCGAGGGT 1463 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGA 563464 | ||| || ||||| || || ||||||| Sbjct 1462 GATAGTCTTTCCAGTTAGGGTCTTAACGA 1434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029230899168190