Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1016 242 7e-59 seq940 107 4e-18 >seq1016 Length=40071 Score = 242 bits (268), Expect = 7e-59 Identities = 735/1118 (66%), Gaps = 33/1118 (3%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT-TGGCCTCGGG 221475 |||| |||| ||||||| |||||||| |||||| ||||||| || | | |||||||| Sbjct 23355 GTCAAGGCACCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAG-CTGTCTAGCCTCGGG 23297 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 || ||| |||| |||||| | | || | || || || || | || |||| | | Sbjct 23296 GGAGTCGAATGGCAGACGCAGAGCCAGGAAAGCATCAGCAAGACCGTTGACACCGAGAGC 23237 Query 221536 GATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTC 221595 ||||| | ||| | |||| |||||| || ||||| || |||||| || Sbjct 23236 AATGGGGCGGTGACGGAAGTTGCTCTTCTTCGCTTCAGGAACGGGGTAGTAGTTGATATC 23177 Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATT 221655 || | ||||| ||||| || || || | || |||||| ||||| | | Sbjct 23176 AATGATCTTGTTCAGGTTGTGAACGAGAACCTGCACGACCTCGTGGAGCTT---GCCA-- 23122 Query 221656 GAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGC 221715 || | ||||||| ||| | || | || ||| ||| | ||||| | | || Sbjct 23121 -AAGTCATACTCGCC----TCGGGCAGAG--TCAACATAAGTGGGGAGGGCGAGGGAAGC 23069 Query 221716 CAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTT 221775 |||||| || || |||||||| || | | |||| | ||||| || || ||||| Sbjct 23068 CAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTCAGTGCACAGGTT 23009 Query 221776 GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTA 221835 | || || || ||||||| || || ||| ||| ||| ||| |||||||| Sbjct 23008 GGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTA 22949 Query 221836 GAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCT 221895 |||||| ||||| |||||||| ||||||| | ||||| || |||||| | ||| Sbjct 22948 GAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGAGCT-TCT 22890 Query 221896 G-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACC-CG-GTATAGAGCAT 221952 | || | | ||| | | | ||||| || || ||| || ||| ||||| Sbjct 22889 GAGCCTTGATAGTCTTGCGGCCACGGCCCTC---CTGCTCGTACTTCGCGTAGAGAGC-- 22835 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACT 222012 ||| |||| |||||||| | || ||||||| || | | |||||| | || | Sbjct 22834 GTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGCCTCGTTGGGACAGAAGAGTGT 22775 Query 222013 CCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAA 222072 ||||| |||| | | || | || ||||||||| || || |||||| || | || Sbjct 22774 CCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAGTCCACAAAGCGTAGAA 22715 Query 222073 GAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAA 222132 ||| || | || || ||||||| |||| ||| |||| |||||| | ||||| || Sbjct 22714 GAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCAAGGAACTCGAA 22655 Query 222133 AATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACC 222192 | || ||||||||||||||||| |||| ||| | |||||| || |||||||| ||||| Sbjct 22654 GACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAGCGCCAGGGCGCTTGTTACCACC 22595 Query 222193 CTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGG 222251 ||| | || ||| | | | ||| || | || || | || || | ||||||| Sbjct 22594 CTGGT-CAACATAGCGGGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGG 22536 Query 222252 ATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGT-TACTGGCAGAC 222307 | |||||||| || |||||||| |||| || | | ||| || |||| Sbjct 22535 AGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAGCGCGAATGCGGTGGACGTTCAGA- 22477 Query 222308 ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATG 222367 |||||||| || ||| || ||||||||||| ||| ||||||||||||| ||| Sbjct 22476 ---CCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATA 22420 Query 222368 CCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTG 222427 ||||| || ||| | | |||| | ||| || ||||| | | ||| | | || Sbjct 22419 CCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCAAGCTGGGGCTGGGGA 22360 Query 222428 GAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCG 222487 | | ||| || |||| ||||| |||||| || ||||| | ||||||| | | Sbjct 22359 GTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGG 22300 Query 222488 TACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT 222525 || ||||| | | | | | |||| || |||||||| Sbjct 22299 TATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAAT 22262 Score = 84.2 bits (92), Expect = 4e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 221155 GTACAGGTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCT 221214 ||| | ||| || ||| | ||||||| || ||||||| |||||| || ||| || || Sbjct 23608 GTAGATGTTCGAGGTGTAGGGTTCGAAGCACTCGTTGAAGCCCAGAATTTGACTGGTACT 23549 Query 221215 GGCGGTGGGCATGGGTGCCACCAGCAGACTGTTGCG 221250 ||| || |||||||| || ||||||||||||||||| Sbjct 23548 GGCAGTAGGCATGGGGGCGACCAGCAGACTGTTGCG 23513 >seq940 Length=59259 Score = 107 bits (118), Expect = 4e-18 Identities = 292/448 (65%), Gaps = 11/448 (2%) Strand=Plus/Plus Query 25878 GCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCAT 25937 ||| ||||| ||||| || ||||| ||||| ||||| ||| || || || || |||| Sbjct 49767 GCGTCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCAT 49826 Query 25938 CTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCA 25996 ||||||||| ||| || || ||||| || ||| ||||| ||||||||||| ||| Sbjct 49827 CTTCTGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTG-ACTTTCTCCAACGAGCTGATCT 49885 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056 | |||||||||||||||| || || ||||| ||||| | | | |||| || || Sbjct 49886 CTCGTGACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTC---CCACATGAACC 49942 Query 26057 ACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGG 26116 || || || || || | ||||| ||||| || | || ||| ||| Sbjct 49943 ACCGCCCCGATCCTAAGGTGGTTCAGGACATCATTGTTGAGGCCGTCGGCATTGAGCAGG 50002 Query 26117 AGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCC 26176 |||| | | ||||||||| || |||||| || Sbjct 50003 AGTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGTGCG 50062 Query 26177 AATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTAC 26235 | ||||| |||| || || |||| ||||| ||| | || || | | |||| Sbjct 50063 AGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGC-TCTCGGCAACAAGAAGTACTAC 50121 Query 26236 AGTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293 | |||| | ||||| |||||||| ||||| ||| || ||| || |||||||||| Sbjct 50122 A--ACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACT 50179 Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||| || ||| | ||||| ||||| || Sbjct 50180 TCTTCGAGAAGCGTGTCGGTGACTACCA 50207 Score = 89.7 bits (98), Expect = 1e-12 Identities = 160/233 (69%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| ||||||||| || ||||||||||| Sbjct 49308 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATCTC 49367 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 ||||||| | ||| |||| || | || ||||| ||| || ||| | Sbjct 49368 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTCATTTCC 49427 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| |||| ||||| || ||||| || ||||| || |||||||| || |||| | Sbjct 49428 CACGTCCTGGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGTCGAGCGT 49487 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | || || ||| |||||| || |||||||| |||||||| Sbjct 49488 TTCAGTGGAGAGGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 49540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928830507400640