Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1016 242 7e-59
seq940 107 4e-18
>seq1016
Length=40071
Score = 242 bits (268), Expect = 7e-59
Identities = 735/1118 (66%), Gaps = 33/1118 (3%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT-TGGCCTCGGG 221475
|||| |||| ||||||| |||||||| |||||| ||||||| || | | ||||||||
Sbjct 23355 GTCAAGGCACCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAG-CTGTCTAGCCTCGGG 23297
Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535
|| ||| |||| |||||| | | || | || || || || | || |||| | |
Sbjct 23296 GGAGTCGAATGGCAGACGCAGAGCCAGGAAAGCATCAGCAAGACCGTTGACACCGAGAGC 23237
Query 221536 GATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTC 221595
||||| | ||| | |||| |||||| || ||||| || |||||| ||
Sbjct 23236 AATGGGGCGGTGACGGAAGTTGCTCTTCTTCGCTTCAGGAACGGGGTAGTAGTTGATATC 23177
Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATT 221655
|| | ||||| ||||| || || || | || |||||| ||||| | |
Sbjct 23176 AATGATCTTGTTCAGGTTGTGAACGAGAACCTGCACGACCTCGTGGAGCTT---GCCA-- 23122
Query 221656 GAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGC 221715
|| | ||||||| ||| | || | || ||| ||| | ||||| | | ||
Sbjct 23121 -AAGTCATACTCGCC----TCGGGCAGAG--TCAACATAAGTGGGGAGGGCGAGGGAAGC 23069
Query 221716 CAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTT 221775
|||||| || || |||||||| || | | |||| | ||||| || || |||||
Sbjct 23068 CAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTCAGTGCACAGGTT 23009
Query 221776 GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTA 221835
| || || || ||||||| || || ||| ||| ||| ||| ||||||||
Sbjct 23008 GGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTA 22949
Query 221836 GAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCT 221895
|||||| ||||| |||||||| ||||||| | ||||| || |||||| | |||
Sbjct 22948 GAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGAGCT-TCT 22890
Query 221896 G-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACC-CG-GTATAGAGCAT 221952
| || | | ||| | | | ||||| || || ||| || ||| |||||
Sbjct 22889 GAGCCTTGATAGTCTTGCGGCCACGGCCCTC---CTGCTCGTACTTCGCGTAGAGAGC-- 22835
Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACT 222012
||| |||| |||||||| | || ||||||| || | | |||||| | || |
Sbjct 22834 GTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGCCTCGTTGGGACAGAAGAGTGT 22775
Query 222013 CCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAA 222072
||||| |||| | | || | || ||||||||| || || |||||| || | ||
Sbjct 22774 CCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAGTCCACAAAGCGTAGAA 22715
Query 222073 GAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAA 222132
||| || | || || ||||||| |||| ||| |||| |||||| | ||||| ||
Sbjct 22714 GAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCAAGGAACTCGAA 22655
Query 222133 AATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACC 222192
| || ||||||||||||||||| |||| ||| | |||||| || |||||||| |||||
Sbjct 22654 GACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAGCGCCAGGGCGCTTGTTACCACC 22595
Query 222193 CTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGG 222251
||| | || ||| | | | ||| || | || || | || || | |||||||
Sbjct 22594 CTGGT-CAACATAGCGGGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGG 22536
Query 222252 ATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGT-TACTGGCAGAC 222307
| |||||||| || |||||||| |||| || | | ||| || ||||
Sbjct 22535 AGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAGCGCGAATGCGGTGGACGTTCAGA- 22477
Query 222308 ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATG 222367
|||||||| || ||| || ||||||||||| ||| ||||||||||||| |||
Sbjct 22476 ---CCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTGTCATAGATA 22420
Query 222368 CCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTG 222427
||||| || ||| | | |||| | ||| || ||||| | | ||| | | ||
Sbjct 22419 CCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCAAGCTGGGGCTGGGGA 22360
Query 222428 GAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCG 222487
| | ||| || |||| ||||| |||||| || ||||| | ||||||| | |
Sbjct 22359 GTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGG 22300
Query 222488 TACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT 222525
|| ||||| | | | | | |||| || ||||||||
Sbjct 22299 TATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAAT 22262
Score = 84.2 bits (92), Expect = 4e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 221155 GTACAGGTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCT 221214
||| | ||| || ||| | ||||||| || ||||||| |||||| || ||| || ||
Sbjct 23608 GTAGATGTTCGAGGTGTAGGGTTCGAAGCACTCGTTGAAGCCCAGAATTTGACTGGTACT 23549
Query 221215 GGCGGTGGGCATGGGTGCCACCAGCAGACTGTTGCG 221250
||| || |||||||| || |||||||||||||||||
Sbjct 23548 GGCAGTAGGCATGGGGGCGACCAGCAGACTGTTGCG 23513
>seq940
Length=59259
Score = 107 bits (118), Expect = 4e-18
Identities = 292/448 (65%), Gaps = 11/448 (2%)
Strand=Plus/Plus
Query 25878 GCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCAT 25937
||| ||||| ||||| || ||||| ||||| ||||| ||| || || || || ||||
Sbjct 49767 GCGTCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCAT 49826
Query 25938 CTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCA 25996
||||||||| ||| || || ||||| || ||| ||||| ||||||||||| |||
Sbjct 49827 CTTCTGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTG-ACTTTCTCCAACGAGCTGATCT 49885
Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056
| |||||||||||||||| || || ||||| ||||| | | | |||| || ||
Sbjct 49886 CTCGTGACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTC---CCACATGAACC 49942
Query 26057 ACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGG 26116
|| || || || || | ||||| ||||| || | || ||| |||
Sbjct 49943 ACCGCCCCGATCCTAAGGTGGTTCAGGACATCATTGTTGAGGCCGTCGGCATTGAGCAGG 50002
Query 26117 AGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCC 26176
|||| | | ||||||||| || |||||| ||
Sbjct 50003 AGTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGTGCG 50062
Query 26177 AATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTAC 26235
| ||||| |||| || || |||| ||||| ||| | || || | | ||||
Sbjct 50063 AGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGC-TCTCGGCAACAAGAAGTACTAC 50121
Query 26236 AGTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293
| |||| | ||||| |||||||| ||||| ||| || ||| || ||||||||||
Sbjct 50122 A--ACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACT 50179
Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCA 26321
|||| || ||| | ||||| ||||| ||
Sbjct 50180 TCTTCGAGAAGCGTGTCGGTGACTACCA 50207
Score = 89.7 bits (98), Expect = 1e-12
Identities = 160/233 (69%), Gaps = 3/233 (1%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | ||| ||||||||| || |||||||||||
Sbjct 49308 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATCTC 49367
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594
||||||| | ||| |||| || | || ||||| ||| || ||| |
Sbjct 49368 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTCATTTCC 49427
Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|||| |||| ||||| || ||||| || ||||| || |||||||| || |||| |
Sbjct 49428 CACGTCCTGGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGTCGAGCGT 49487
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|||| | || || ||| |||||| || |||||||| ||||||||
Sbjct 49488 TTCAGTGGAGAGGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 49540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928830507400640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |