Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq107 120 2e-21 >seq107 Length=23034 Score = 120 bits (132), Expect = 2e-21 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| |||||||| ||||| || ||| ||||||| || || Sbjct 1645 ACGTAGACGGAGGACAAGGTGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAAAGGGT 1586 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||||||| ||||| ||||| || ||||||||||| || || || ||||| || Sbjct 1585 ACGACCATCTTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCC 1526 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||| || ||||| ||||| ||||| ||||| | | | | | || | Sbjct 1525 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGA-CCTCGA 1467 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762 |||| ||||| || || || || |||||||||| Sbjct 1466 GGGTGATAGTCTTTCCAGTTAGGGTCTTAACGA 1434 Score = 86.0 bits (94), Expect = 4e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 |||||||| | || || | ||| ||||| ||||| ||||| || |||||||| || Sbjct 1318 TTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGC 1259 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||||||||| || |||||||| || ||||| ||||| || |||||||| Sbjct 1258 TGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATCG 1199 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGA 480750 || | |||||||| || ||||| || |||| Sbjct 1198 CTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGTGA 1162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268126396437188